Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0177 |
Symbol | rpsO |
ID | 5136406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 180400 |
End bp | 180669 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531637 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_001216140 |
Protein GI | 147675292 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGA ATGCAGAAAC TAAAGCAGCA ATCGTTGCTG AATACGCACG TTGCGAAAAT GACACAGGTT CACCAGAAGT ACAGATCGCT CTACTGACTG CTTCTATCAA CCACCTGCAA GGTCACTTCC AAGCACACAA AGGCGATCAC CACAGCCGTC GTGGTCTGCT ACGTATGGTT TCAAGCCGTC GTAAACTGCT GGACTACCTG AAAGGTAAAG ATCTGTCTCG TTACCAAGAT CTGATCAAAC GTCTAGGCCT GCGTCGTTAA
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Protein sequence | MSLNAETKAA IVAEYARCEN DTGSPEVQIA LLTASINHLQ GHFQAHKGDH HSRRGLLRMV SSRRKLLDYL KGKDLSRYQD LIKRLGLRR
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