| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0174 |
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| Symbol | infB |
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| ID | 5136138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 176124 |
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| End bp | 178820 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531634 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001216137 |
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| Protein GI | 147675225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00015566 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA TTACCGTTAA AGCACTGAGT GAAGAAATTG GAACACCAGT AGACCGCTTA
TTAGAGCAAC TTGCTGATGC AGGAATGAAC AAGGCTGTTG CGGATCACGT ATCTGAGGAT
GAGAAGCAGA AGCTGCTGGC TCATTTACGT AAAGAGCACG GCGATGCGAC AGGCTCTGAG
CCAACGCGTT TGACACTCCA GCGTAAAACC CGTAGCACAC TGAGCGTGAA TGCCGGTGGC
GGTAAAAGTA AGAATGTTCA AGTTGAAGTG CGCAAAAAAC GTACGTATGT TAAGCGCAGT
TCTGTTGAAG ATGAAGCGAC TCGTGAAGCG GAAGAAGCCG CAATGCGCGC CGCAGAAGAG
CAAGCAAAAC GTGAAGCTGA AGAAGCTGCA CAACGTGCGG CAGAAGAAAA AGCCAAACGT
GAAGCAGAAG AAGCCGCCAA GCGTGAAGCA GAGGCAAAAC GTATGGCTGA AGAGAAAGCG
AAGCGTGAAA CGCAAGCGGC TACACAACCA CGTTCTGACG AAGAAAAATT GAAGCAAGAA
GCAGCGCGCA AAGAAGCCGA GGCGCTAAAA CGTCGCCAGG AAGAAGAAGC AAGACGTAAG
GCCGAAGAGG AAAGTCGCCG TCAACTTGAA AAAGTACGCG AATTGGCTGA AAAAAATGGT
GAGCGTTGGT CTGCTGATAA AGAGACTGTA GGTGATATGC AAGAAAACAC AGATTACCAT
GTAACGACTT CGCGTTATGC ACGCGAAGCG GAAGATGAGG CTGACCTCCA CGAAGAAGGT
GCTCGTCGTC GCTCGACAAA AGCGAATAAG AGAAAGATGT CCTCTCGTGA CGATAACCAA
GAGCGCGATT CTCGTCCTCG TGGTGGTAAA GCGGGTCGTA AAGGTCGCAT CAACAAGCCA
ATGTCTATGC AACACGGTTT TGATAAAACC GCTGTCGTCG CGAAAGCGGA TGTTGTGGTT
GGTGAAACTA TCGTTGTTTC TGAACTGGCA CAAAAAATGT CAGTGAAAGC GACAGAAGTC
ATCAAAGTGA TGATGAAAAT GGGCGCGATG GCGACCATTA ACCAAGTGAT TGACCAAGAA
ACTGCTCAAC TGGTAGCGGA AGAAATGGGT CACAAAGTGG TTCTGCGTAA GGAAAATGAG
CTGGAAGAAG CGATTCTGTC GGATCGTGAT GACAAGTTCG AAGAAGTTTC CCGTGCGCCA
GTCGTGACCA TCATGGGTCA CGTTGACCAC GGTAAAACCT CAACGCTGGA CTATATCCGT
CGTACCCACG TTGCTTCTGG TGAAGCGGGT GGTATTACTC AGCACATCGG TGCTTACCAC
GTTGAAACGC CAAACGGCAT GATCACCTTC CTGGATACTC CTGGACACGC GGCGTTTACC
GCTATGCGTG CTCGTGGTGC ACAAGCAACG GATATCGTAG TACTGGTTGT TGCAGCGGAC
GATGGCGTAA TGCCACAAAC CGTCGAGGCT ATCCAACACG CGAAAGCGGC GGGAGTTCCT
CTGATTGTTG CAGTAAACAA GATCGATAAA GACACGGCTA ACCCAGATAA CGTTAAAACT
GAACTGTCAC AGTACAATGT GATGCCTGAA GAGTGGGGCG GTGACAACAT GTTTGTTCAC
ATCTCTGCGA AACAAGGTAC TAACATTGAC GGTCTACTGG AAGCTATTCT GCTGCAAGCT
GAAGTTCTTG AGCTGAAAGC GGTGAAACAA GGTATGGCGT CTGGCGTGGT CATCGAATCT
CGTCTGGATA AAGGCCGTGG TCCGGTAGCA ACTGTTCTGG TTCAATCGGG CACTCTGCGT
AAGGGTGACA TTGTTCTGTG TGGCCAAGAA TATGGCCGCG TTCGTGCAAT GCGTGATGAA
GTCGGTAACG AAGTTGAAGA AGCGGGCCCA TCGATCCCAG TTGAAATCCT GGGTCTGTCT
GGTGTTCCAG CGGCCGGTGA TGAAGCAACC GTAGTACGTG ATGAGCGTAA AGCGCGTGAA
GTGGCTAACT ACCGTGCAGG TAAGTTCCGC GAAGTGAAAC TGGCGCGTCA ACAGAAGTCT
AAACTGGAGA ACATGTTCTC TAACATGACT GCAGGTGATG TCGCTGAGCT GAACATTGTA
CTGAAAGCTG ACGTACAAGG TTCAGTGGAA GCGATTGCGG ACTCGTTGAC CAAACTTTCA
ACAGACGAAG TGAAAGTCAA TATCGTCGGC TCTGGTGTCG GTGGTATTAC TGAAACGGAT
GCGGTTCTGG CGGCGGCTTC TAACGCTATC GTGGTTGGCT TTAACGTACG TGCTGATGCG
TCAGCTCGCC GTATGATTGA AGCTGAAAAC ATCGATCTGC GTTACTACTC CATCATTTAC
CAATTGATCG ATGAAGTGAA ACAGGCGATG AGCGGTATGC TGTCTCCTGA GTTCAAACAA
GAGATCATCG GTCTGGCGGA AGTTCGTGAC GTATTTAAGT CACCGAAACT GGGTGCGATT
GCAGGCTGTA TGGTCACTGA AGGTGTGATC AAACGTAATG CTCCAATCCG CGTTCTGCGT
GATAACGTAG TTATCTATGA AGGCGAACTG GAATCGCTAC GTCGCTTTAA AGATGACGTT
GCAGAAGTGA AGAATGGTTA CGAGTGTGGT ATCGGCGTTA AGAACTACAA TGATGTTCGC
GTCGGTGACC AGATCGAAGT ATTCGAAACG ATCGAAATCC AACGTACCAT CGACTAA
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| Protein sequence | MTQITVKALS EEIGTPVDRL LEQLADAGMN KAVADHVSED EKQKLLAHLR KEHGDATGSE
PTRLTLQRKT RSTLSVNAGG GKSKNVQVEV RKKRTYVKRS SVEDEATREA EEAAMRAAEE
QAKREAEEAA QRAAEEKAKR EAEEAAKREA EAKRMAEEKA KRETQAATQP RSDEEKLKQE
AARKEAEALK RRQEEEARRK AEEESRRQLE KVRELAEKNG ERWSADKETV GDMQENTDYH
VTTSRYAREA EDEADLHEEG ARRRSTKANK RKMSSRDDNQ ERDSRPRGGK AGRKGRINKP
MSMQHGFDKT AVVAKADVVV GETIVVSELA QKMSVKATEV IKVMMKMGAM ATINQVIDQE
TAQLVAEEMG HKVVLRKENE LEEAILSDRD DKFEEVSRAP VVTIMGHVDH GKTSTLDYIR
RTHVASGEAG GITQHIGAYH VETPNGMITF LDTPGHAAFT AMRARGAQAT DIVVLVVAAD
DGVMPQTVEA IQHAKAAGVP LIVAVNKIDK DTANPDNVKT ELSQYNVMPE EWGGDNMFVH
ISAKQGTNID GLLEAILLQA EVLELKAVKQ GMASGVVIES RLDKGRGPVA TVLVQSGTLR
KGDIVLCGQE YGRVRAMRDE VGNEVEEAGP SIPVEILGLS GVPAAGDEAT VVRDERKARE
VANYRAGKFR EVKLARQQKS KLENMFSNMT AGDVAELNIV LKADVQGSVE AIADSLTKLS
TDEVKVNIVG SGVGGITETD AVLAAASNAI VVGFNVRADA SARRMIEAEN IDLRYYSIIY
QLIDEVKQAM SGMLSPEFKQ EIIGLAEVRD VFKSPKLGAI AGCMVTEGVI KRNAPIRVLR
DNVVIYEGEL ESLRRFKDDV AEVKNGYECG IGVKNYNDVR VGDQIEVFET IEIQRTID
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