| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0173 |
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| Symbol | nusA |
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| ID | 5136621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 174612 |
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| End bp | 176099 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531633 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001216136 |
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| Protein GI | 147674353 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000303519 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG AAATTTTAGC GGTAGTTGAG GCGGTTTCTA ACGAGAAAGC GGTACCTCGT
GAGCGTATTT TTGAAGCGCT GGAAACTGCG TTAGCGACTT CAACCAAAAA GAAGTATGAA
ATCGAGATCG ATGTGCGCGT AGCCATCGAT CGCAAAACAG GTGCGTTTGA AACGTTCCGC
CGTTGGTTAG TGGTTGAGAA TGTTGAGCAC CCAACCAAAG AGATCTCATT TGAAGCGGCG
AGCTTTGATG ATGACTCGGT TCAACTGGGT GACTATATCG AAGATCAGAT CGAATCAGTA
ACCTTTGACC GTATTACCAC GCAAACTGCG AAACAAGTGA TCGTACAAAA AGTGCGTGAA
GCAGAACGTG CACAGATTGT TGAACAATTC ATCGATAACG AAGGTGAATT GGTGACTGGT
GTAGTGAAGA AAGTGAACCG TGAAACCGTG ATCCTCGATC TGGGTAACAA CGCTGAAGCG
GTTATCCTAC GTGAAGATCA ACTGCCACGC GAAAACTTCC GTCCTGGCGA TCGTGTTCGT
GGTTTGCTGT ACAAAGTGGC TCCAGAAGCA CGTGGTTTCC AACTCTTCAT CACTCGTTCT
AAGCCAGAAA TGTTGGCAGA ACTGTTCCGT GTAGAAGTTC CAGAAATTGG TGAAGAGCTG
ATTGAGCTGA AAGCGGCTGC GCGTGATCCT GGTTCACGTG CCAAGATCGC GGTAAAAACC
AATGATAAGC GTATCGACCC TGTTGGTGCG TGTGTGGGTA TGCGTGGTGC ACGTGTACAA
GCGGTTTCTG GCGAACTGGG TGGCGAGCGT ATTGATATCG TTTTGTGGGA TGATAACCCA
GCGCAATTCG TCATTAATGC CATGGCACCA GCCGATGTGG CATCGATCAT TATGGATGAA
GATGCACACT CAATGGATAT CGCTGTTGAG GCTGATAACC TTGCGCAAGC GATCGGTCGT
AACGGTCAAA ACGTACGTTT GGCTTCTCAA CTGACCGGTT GGGAACTGAA TGTGATGACG
GTTGCGGATC TACAGAAGAA ACACCAAGAA GAGTCAATGG CATCCATCGA GAACTTCATG
AAGTATCTCG ATATTGAGCA AGATTTTGCT GAGCTGCTGG TTGAAGAAGG CTTCTCTACG
CTAGAAGAGA TCGCTTACGT ACCAATGAAT GAGCTGCTTG ATGTTGATGG CATGGATGAA
GATCTGGCAG ATGAGCTACG TAGTCGTGCG AAAGAAGCGC TGACGACGAT TGCTTTGGCA
AAAGAAGAGT CGTTCGAAGG CCTTGAGCCT GCAGAAGATC TGCTTGCATT AGCAGGACTG
GAACGCGACA TGGCATTCAA ACTGGCAGCG AAAGGTGTTG CGACACTGGA AGATCTGGCT
GACCAAGGTG TGGATGATTT AGAAGGTATT GAAGGTCTGA CCGAACAGCG TGCGGGTGAG
CTTATTATGG CGGCTCGTAA CATTTGTTGG TTTGGTGAAG ACGCATAA
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| Protein sequence | MSKEILAVVE AVSNEKAVPR ERIFEALETA LATSTKKKYE IEIDVRVAID RKTGAFETFR
RWLVVENVEH PTKEISFEAA SFDDDSVQLG DYIEDQIESV TFDRITTQTA KQVIVQKVRE
AERAQIVEQF IDNEGELVTG VVKKVNRETV ILDLGNNAEA VILREDQLPR ENFRPGDRVR
GLLYKVAPEA RGFQLFITRS KPEMLAELFR VEVPEIGEEL IELKAAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSGELGGER IDIVLWDDNP AQFVINAMAP ADVASIIMDE
DAHSMDIAVE ADNLAQAIGR NGQNVRLASQ LTGWELNVMT VADLQKKHQE ESMASIENFM
KYLDIEQDFA ELLVEEGFST LEEIAYVPMN ELLDVDGMDE DLADELRSRA KEALTTIALA
KEESFEGLEP AEDLLALAGL ERDMAFKLAA KGVATLEDLA DQGVDDLEGI EGLTEQRAGE
LIMAARNICW FGEDA
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