Gene VC0395_A0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0172 
Symbol 
ID5136713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp174138 
End bp174593 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID640531632 
Producthypothetical protein 
Protein accessionYP_001216135 
Protein GI147673580 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000137373 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGTT TAGAAAGACA ACTTACTGAA ATGCTTGAAG CTCCGGTGGT TGCTGCAGGT 
TACGAGTTGG TTGGATTAGA GTTCGTCCGT GCAGGGCAAC ATTCCACACT ACGTATCTTT
ATTGATCACG AAAACGGTAT CACAGTGGAA GACTGCGCAG AAGTAAGTCG CCAAGTGAGT
GCTGTTTTGG ATGTTGAAGA CCCTATTTCG GTCGTTTACA ACCTCGAAGT GTCTTCTCCT
GGTCTAGAAA GACCACTCTT TAAAGCAGCA CATTACGAGC AGTTTATTGG TCACGAGGTC
AGCATCGTTT TGAAGATGGC TGTTGGCAAC CGTCGCAAGT GGAAAGGGGT CATCCAATCA
ATTGATGGTG AAACCGTAGC CGTGATGGTT GATGGGCAAG AAGAACACTT TGCCTTAAGC
AACATTTCAA AAGCTAACCT GATCCCTAAA TTTTAA
 
Protein sequence
MTGLERQLTE MLEAPVVAAG YELVGLEFVR AGQHSTLRIF IDHENGITVE DCAEVSRQVS 
AVLDVEDPIS VVYNLEVSSP GLERPLFKAA HYEQFIGHEV SIVLKMAVGN RRKWKGVIQS
IDGETVAVMV DGQEEHFALS NISKANLIPK F