Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0172 |
Symbol | |
ID | 5136713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 174138 |
End bp | 174593 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531632 |
Product | hypothetical protein |
Protein accession | YP_001216135 |
Protein GI | 147673580 |
COG category | [S] Function unknown |
COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000137373 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGTT TAGAAAGACA ACTTACTGAA ATGCTTGAAG CTCCGGTGGT TGCTGCAGGT TACGAGTTGG TTGGATTAGA GTTCGTCCGT GCAGGGCAAC ATTCCACACT ACGTATCTTT ATTGATCACG AAAACGGTAT CACAGTGGAA GACTGCGCAG AAGTAAGTCG CCAAGTGAGT GCTGTTTTGG ATGTTGAAGA CCCTATTTCG GTCGTTTACA ACCTCGAAGT GTCTTCTCCT GGTCTAGAAA GACCACTCTT TAAAGCAGCA CATTACGAGC AGTTTATTGG TCACGAGGTC AGCATCGTTT TGAAGATGGC TGTTGGCAAC CGTCGCAAGT GGAAAGGGGT CATCCAATCA ATTGATGGTG AAACCGTAGC CGTGATGGTT GATGGGCAAG AAGAACACTT TGCCTTAAGC AACATTTCAA AAGCTAACCT GATCCCTAAA TTTTAA
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Protein sequence | MTGLERQLTE MLEAPVVAAG YELVGLEFVR AGQHSTLRIF IDHENGITVE DCAEVSRQVS AVLDVEDPIS VVYNLEVSSP GLERPLFKAA HYEQFIGHEV SIVLKMAVGN RRKWKGVIQS IDGETVAVMV DGQEEHFALS NISKANLIPK F
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