Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0166 |
Symbol | ftsH |
ID | 5137394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 168891 |
End bp | 170846 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531626 |
Product | cell division protein FtsH |
Protein accession | YP_001216131 |
Protein GI | 147673292 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000721667 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGACA TGGCAAAAAA TTTAATCCTG TGGCTTGTGA TTGCTGTCGT TTTGATGTCT GTATTCCAGA GCTTCGGCCC CGGTGAGAAT AACGGCAGAG CAGTCGACTA CACCACATTT GTAAAGGAAG TTGGTCAAGG CCAGATTCAG GAAGCTCAAT TCAACAACGG TGAAATTACT TTCATGCGTC GTGGAGGCGG CAGCCGTTAT GTAACTTACA TGCCGGTTTA TGATCAAAAG CTCCTCGATG ACTTGATCAA TCAAGACGTG AAAGTACAAG GTACGCCTCC TGAAGAGCAA AGCTTGCTGG GTACCATTTT CATCTCTTGG TTCCCAATGA TTCTATTGAT TGGGGTTTGG ATCTTCTTCA TGCGTCAAAT GCAAGGTGGC GGTGGCAAAG GTGCCATGTC ATTTGGTAAG AGCAAAGCGC GTATGATGAG TGAAGACCAG ATAAAAACCA CTTTCAGCGA CGTTGCGGGC TGTGATGAAG CAAAAGAAGA TGTGAAAGAA CTGGTCGATT ACCTGCGCGA TCCGAGCCGC TTCCAAAAGC TGGGTGGTAA GATCCCAACG GGTGTACTCA TGGTTGGTCC TCCTGGTACA GGTAAAACCT TGCTTGCCAA AGCGATTGCT GGTGAAGCTA AAGTGCCATT CTTTACTATC TCTGGTTCGG ATTTCGTTGA AATGTTTGTC GGTGTCGGTG CATCTCGTGT GCGTGACATG TTCGAACAAG CGAAGAAAGC CTCTCCATGT ATTATTTTCA TTGATGAAAT TGATGCAGTG GGTCGTCAGC GTGGCGCGGG TGTTGGTGGT GGTCACGATG AACGTGAGCA GACACTAAAC CAAATGCTGG TTGAGATGGA TGGTTTTGAA GGCAATGAAG GCATTATTGT CATCGCGGCA ACCAACCGTC CTGACGTGTT GGACCCAGCA TTGCTGCGTC CGGGACGTTT TGACCGTCAA GTCGTGGTAG GCCTGCCAGA TGTGCGTGGT CGTGAGCAAA TTCTTAAAGT GCATATGCGC AAAGTGCCTC TGGCGAATGA TGTAGAGCCA TCATTGATTG CGCGTGGTAC TCCTGGATTC TCTGGTGCGG ATTTAGCGAA CTTAGTTAAC GAAGCGGCGC TGTTTGCTGC TCGTGGCAAC AAGCGCAACG TCTCTATGGT TGAGTTTGAA CTTGCAAAAG ACAAAATCAT GATGGGTGCA GAGCGCCGTT CAATGGTGAT GTCTGAAGAG ATAAAAGAGT CTACCGCTTA TCATGAGGCT GGTCATGCGG TAGTAGGTCG CCTTGTACCT GAGCATGATC CGGTTTACAA AGTGTCGATC ATTCCTCGCG GTCGTGCATT GGGTGTCACC ATGTACTTGC CTGAGCAAGA TCGCGTGAGT ATGTCTAAAC AGCATCTGGA ATCAATGATC TCTAGCTTGT ACGGCGGTCG TCTTGCTGAA GAGTTGATTT ACGGCAAAGA GAAAGTTTCA ACAGGCGCAT CAAACGATAT CGAGCGTGCA ACAGAAATTG CTCGTAAGAT GGTGACCCAA TGGGGCTTCT CTGAAAAGCT AGGCCCTATG TTGTATGCGG AAGATGAAGG TGAAGTGTTC CTTGGGCGCA GTGTGACACA GACGAAACAC ATGTCTGATG ACACCGCGAA GCTGATTGAT GACGAAGTGC GTCAAATCAT TGATCGTAAC TACGAACGAG CTCGCCAAAT CATTATGGAT AATATGGATA TCATGCATGC GATGAAAGAT GCATTGATGA AGTATGAAAC TATCGATGCA GGTCAGATTG ATGACTTGAT GGCGCGTAAG CCTGTGATTC GTGAACCAGC AGGTTGGGGT GAACAATCGA AAACTCCGTC TGCACCTGAA GTAAAAGCTG AGCCTGAAGC TAAGGCGGAA GAATCTACAG CAGAGACTGC TTCATCGGAT GTCGCGACAG CAAGCGAGAA AAAAGACGCT GAATAA
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Protein sequence | MSDMAKNLIL WLVIAVVLMS VFQSFGPGEN NGRAVDYTTF VKEVGQGQIQ EAQFNNGEIT FMRRGGGSRY VTYMPVYDQK LLDDLINQDV KVQGTPPEEQ SLLGTIFISW FPMILLIGVW IFFMRQMQGG GGKGAMSFGK SKARMMSEDQ IKTTFSDVAG CDEAKEDVKE LVDYLRDPSR FQKLGGKIPT GVLMVGPPGT GKTLLAKAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM FEQAKKASPC IIFIDEIDAV GRQRGAGVGG GHDEREQTLN QMLVEMDGFE GNEGIIVIAA TNRPDVLDPA LLRPGRFDRQ VVVGLPDVRG REQILKVHMR KVPLANDVEP SLIARGTPGF SGADLANLVN EAALFAARGN KRNVSMVEFE LAKDKIMMGA ERRSMVMSEE IKESTAYHEA GHAVVGRLVP EHDPVYKVSI IPRGRALGVT MYLPEQDRVS MSKQHLESMI SSLYGGRLAE ELIYGKEKVS TGASNDIERA TEIARKMVTQ WGFSEKLGPM LYAEDEGEVF LGRSVTQTKH MSDDTAKLID DEVRQIIDRN YERARQIIMD NMDIMHAMKD ALMKYETIDA GQIDDLMARK PVIREPAGWG EQSKTPSAPE VKAEPEAKAE ESTAETASSD VATASEKKDA E
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