Gene VC0395_A0166 details

Gene Information

• Locus tag: VC0395_A0166
• Symbol: ftsH
• ID: 5137394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 168891
• End bp: 170846
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640531626
• Product: cell division protein FtsH
• Protein accession: YP_001216131
• Protein GI: 147673292
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000721667
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTGACA TGGCAAAAAA TTTAATCCTG TGGCTTGTGA TTGCTGTCGT TTTGATGTCT 
GTATTCCAGA GCTTCGGCCC CGGTGAGAAT AACGGCAGAG CAGTCGACTA CACCACATTT 
GTAAAGGAAG TTGGTCAAGG CCAGATTCAG GAAGCTCAAT TCAACAACGG TGAAATTACT 
TTCATGCGTC GTGGAGGCGG CAGCCGTTAT GTAACTTACA TGCCGGTTTA TGATCAAAAG 
CTCCTCGATG ACTTGATCAA TCAAGACGTG AAAGTACAAG GTACGCCTCC TGAAGAGCAA 
AGCTTGCTGG GTACCATTTT CATCTCTTGG TTCCCAATGA TTCTATTGAT TGGGGTTTGG 
ATCTTCTTCA TGCGTCAAAT GCAAGGTGGC GGTGGCAAAG GTGCCATGTC ATTTGGTAAG 
AGCAAAGCGC GTATGATGAG TGAAGACCAG ATAAAAACCA CTTTCAGCGA CGTTGCGGGC 
TGTGATGAAG CAAAAGAAGA TGTGAAAGAA CTGGTCGATT ACCTGCGCGA TCCGAGCCGC 
TTCCAAAAGC TGGGTGGTAA GATCCCAACG GGTGTACTCA TGGTTGGTCC TCCTGGTACA 
GGTAAAACCT TGCTTGCCAA AGCGATTGCT GGTGAAGCTA AAGTGCCATT CTTTACTATC 
TCTGGTTCGG ATTTCGTTGA AATGTTTGTC GGTGTCGGTG CATCTCGTGT GCGTGACATG 
TTCGAACAAG CGAAGAAAGC CTCTCCATGT ATTATTTTCA TTGATGAAAT TGATGCAGTG 
GGTCGTCAGC GTGGCGCGGG TGTTGGTGGT GGTCACGATG AACGTGAGCA GACACTAAAC 
CAAATGCTGG TTGAGATGGA TGGTTTTGAA GGCAATGAAG GCATTATTGT CATCGCGGCA 
ACCAACCGTC CTGACGTGTT GGACCCAGCA TTGCTGCGTC CGGGACGTTT TGACCGTCAA 
GTCGTGGTAG GCCTGCCAGA TGTGCGTGGT CGTGAGCAAA TTCTTAAAGT GCATATGCGC 
AAAGTGCCTC TGGCGAATGA TGTAGAGCCA TCATTGATTG CGCGTGGTAC TCCTGGATTC 
TCTGGTGCGG ATTTAGCGAA CTTAGTTAAC GAAGCGGCGC TGTTTGCTGC TCGTGGCAAC 
AAGCGCAACG TCTCTATGGT TGAGTTTGAA CTTGCAAAAG ACAAAATCAT GATGGGTGCA 
GAGCGCCGTT CAATGGTGAT GTCTGAAGAG ATAAAAGAGT CTACCGCTTA TCATGAGGCT 
GGTCATGCGG TAGTAGGTCG CCTTGTACCT GAGCATGATC CGGTTTACAA AGTGTCGATC 
ATTCCTCGCG GTCGTGCATT GGGTGTCACC ATGTACTTGC CTGAGCAAGA TCGCGTGAGT 
ATGTCTAAAC AGCATCTGGA ATCAATGATC TCTAGCTTGT ACGGCGGTCG TCTTGCTGAA 
GAGTTGATTT ACGGCAAAGA GAAAGTTTCA ACAGGCGCAT CAAACGATAT CGAGCGTGCA 
ACAGAAATTG CTCGTAAGAT GGTGACCCAA TGGGGCTTCT CTGAAAAGCT AGGCCCTATG 
TTGTATGCGG AAGATGAAGG TGAAGTGTTC CTTGGGCGCA GTGTGACACA GACGAAACAC 
ATGTCTGATG ACACCGCGAA GCTGATTGAT GACGAAGTGC GTCAAATCAT TGATCGTAAC 
TACGAACGAG CTCGCCAAAT CATTATGGAT AATATGGATA TCATGCATGC GATGAAAGAT 
GCATTGATGA AGTATGAAAC TATCGATGCA GGTCAGATTG ATGACTTGAT GGCGCGTAAG 
CCTGTGATTC GTGAACCAGC AGGTTGGGGT GAACAATCGA AAACTCCGTC TGCACCTGAA 
GTAAAAGCTG AGCCTGAAGC TAAGGCGGAA GAATCTACAG CAGAGACTGC TTCATCGGAT 
GTCGCGACAG CAAGCGAGAA AAAAGACGCT GAATAA 

 

Protein sequence

MSDMAKNLIL WLVIAVVLMS VFQSFGPGEN NGRAVDYTTF VKEVGQGQIQ EAQFNNGEIT 
FMRRGGGSRY VTYMPVYDQK LLDDLINQDV KVQGTPPEEQ SLLGTIFISW FPMILLIGVW 
IFFMRQMQGG GGKGAMSFGK SKARMMSEDQ IKTTFSDVAG CDEAKEDVKE LVDYLRDPSR 
FQKLGGKIPT GVLMVGPPGT GKTLLAKAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM 
FEQAKKASPC IIFIDEIDAV GRQRGAGVGG GHDEREQTLN QMLVEMDGFE GNEGIIVIAA 
TNRPDVLDPA LLRPGRFDRQ VVVGLPDVRG REQILKVHMR KVPLANDVEP SLIARGTPGF 
SGADLANLVN EAALFAARGN KRNVSMVEFE LAKDKIMMGA ERRSMVMSEE IKESTAYHEA 
GHAVVGRLVP EHDPVYKVSI IPRGRALGVT MYLPEQDRVS MSKQHLESMI SSLYGGRLAE 
ELIYGKEKVS TGASNDIERA TEIARKMVTQ WGFSEKLGPM LYAEDEGEVF LGRSVTQTKH 
MSDDTAKLID DEVRQIIDRN YERARQIIMD NMDIMHAMKD ALMKYETIDA GQIDDLMARK 
PVIREPAGWG EQSKTPSAPE VKAEPEAKAE ESTAETASSD VATASEKKDA E