Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0165 |
Symbol | rrmJ |
ID | 5136133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 168161 |
End bp | 168790 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531625 |
Product | 23S rRNA methyltransferase J |
Protein accession | YP_001216130 |
Protein GI | 147673945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000113387 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAC AGAAACACTC GGCCAGCTCA ACTCGCTGGT TAAAAGAGCA TTTTGACGAC AAATATGTTA ACGAAGCAAA GAAGAAAGGC TATCGTTCAC GTGCTATCTT CAAAATAGAA GAGATCCAAA ACAAAGATAA ACTACTAAAA GCTGGTATGA CAGTTGTCGA TCTTGGCGCT GCACCTGGTG GATGGTCGCA ATTTGCGGCC AAAGTAGTTG GCGAAGGTGG GCGTGTTATT GCATGTGACC TTTTACCTAT GGAGTCGATT GCGGGGGTGT CTTTCTTGCA AGGTGATTTC CGTGAGGAAG CGGTGCTCAA TGCATTGCTC GATCGAATCC AGCCAGATAT GGTTGATGTA GTGATGTCTG ATATGGCACC TAATATGGCG GGTAACTTGT CCGTCGATCA GCCTCGCGCC ATGTATCTTG TCGAATTGGC ACTGGATATG TGTCGACAAG TTCTGGCTCC CAATGGTAGT TTTGTGGTGA AAGTGTTTCA AGGAGAAGGC TTTGATGATT ATGTCAAAGC AGTAAGAGAC CTGTTTAAAG TGGTTAAAAT CCGTAAACCG GACTCCTCTC GATCACGTTC ACGAGAAGTT TTTATCGTAG CGACTGGTTA CAAAGGTTAA
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Protein sequence | MSKQKHSASS TRWLKEHFDD KYVNEAKKKG YRSRAIFKIE EIQNKDKLLK AGMTVVDLGA APGGWSQFAA KVVGEGGRVI ACDLLPMESI AGVSFLQGDF REEAVLNALL DRIQPDMVDV VMSDMAPNMA GNLSVDQPRA MYLVELALDM CRQVLAPNGS FVVKVFQGEG FDDYVKAVRD LFKVVKIRKP DSSRSRSREV FIVATGYKG
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