| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0157 |
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| Symbol | |
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| ID | 5136002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 157072 |
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| End bp | 158172 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531617 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216122 |
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| Protein GI | 147674168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCGC TCAAAACTTC TTCACGTCAA GCGCGCGACT ACTTTCTGCA TCAACCTTGG
CTGATTTCTT TTTCCTTCAT TATTCTGTTA GCACTCTGGT TAGGCTTAGG CGATTCCAAC
GCCGAAGAGC CGCAAACGGC GATGGAAATA CAAGTCCCTT TAGCCAAAGT CGGTTATCAA
ACGTTTAGCG CAACTCAAAC CGATAAAGTT ATCGAGCTGT ACGGACGCAC TGCGCCGGAT
CGGCAGGCTA AAATTGGTGC TGAAATTGCT GGGCGGATCG CCGAGGTGAA GATTGCGAAA
GGGCAAATGG TCACCAAAAA CCAGATAATC GCCTTGATTG ATAAAGGCGA TCTGGATGCC
CAGTTAGAGC GAGCGAAAGC GCAGCTCAAA GTGCGACAAC AAGAGTTTAA TGCGGCTAGT
GCACTGAAAA ATAAAGGCTT ACAAGGCGAA GTTGCTTTTA CCAATGCTGC TGCTGCTCTC
ACAGATGCAC AATCCTCGCT CAGTACTGTG CAACGTTTAC TGGATAATAC CCAAGTTCGC
GCCCCCTTTG ATGGTGTCGT GGAGACTTTA CCTATCGAAA AAGGCGATTT TGTTGGGATT
GGCGATCCGG TTGCCTCCAT TATCGATCTG CACAAATTGG TGATAGAGGC TGATGTCAGT
GAGCGACACA TTCAACATGT ACAGCTTGAA CAAGCGGCGC GGATCCGCTT TATCGATGGC
ACGCAAACAC AAGGTAAAGT CCGCTATATT TCAAGGCTCT CATCGCCTGC AACCAATACC
TTTGCCATTG AAGTTGAGGT CGATAACCCA CAACAAGCCA TTCCTGCAGG GGTAAGCGCA
GAAGTTGAGT TGAGCCTAAT GTCTCAAGCC GCGATCAAAA TCACCCCCGC CATGCTCGCG
CTCGATGAAG AGGGCAACCT TGGCGTGAAA ACGTTGCAAG GTGAACACGT CAAGTTTGTG
CCAATCCAAC TGGTGAAAGC AGAACAAGAT GGCGTCTGGT TAACCGGACT TGGCGAGCAA
GTGGATATTA TTACCCGTGG ACAAGGATTT GTTCGCGATG GAGATAAGGT TCTCGCCACT
CAACTCAGCG CAACCCACTA G
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| Protein sequence | MFPLKTSSRQ ARDYFLHQPW LISFSFIILL ALWLGLGDSN AEEPQTAMEI QVPLAKVGYQ
TFSATQTDKV IELYGRTAPD RQAKIGAEIA GRIAEVKIAK GQMVTKNQII ALIDKGDLDA
QLERAKAQLK VRQQEFNAAS ALKNKGLQGE VAFTNAAAAL TDAQSSLSTV QRLLDNTQVR
APFDGVVETL PIEKGDFVGI GDPVASIIDL HKLVIEADVS ERHIQHVQLE QAARIRFIDG
TQTQGKVRYI SRLSSPATNT FAIEVEVDNP QQAIPAGVSA EVELSLMSQA AIKITPAMLA
LDEEGNLGVK TLQGEHVKFV PIQLVKAEQD GVWLTGLGEQ VDIITRGQGF VRDGDKVLAT
QLSATH
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