| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0149 |
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| Symbol | |
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| ID | 5136047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 146439 |
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| End bp | 148109 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531609 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | YP_001216114 |
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| Protein GI | 147675513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCCA ATATTAAAAA GACAGCACTA GCCGCCGCAG TAATCGCAGC AGCAACCAGT
GTTTCAGCTC CAGCGTTTGC ACGTAGTGAG CTCACCATCG TGCCAGATTT CTACCCTACA
ATGGTACGTA ACTTCAACCC GTACTTAGCG ACTAACCTGC GTACAACCAC CGACTTTATC
TATGAACCTC TGGTTGTATT CAATGAAATG AAAGGTAATA CGCCTGTTTT CCGTCTGGCA
GAAAGCTACA AAATGGCTGA CGACCTGATG AGCGTGACTT TCGATATCCG CAAAGGCGTT
AAGTGGTCTG ACGGTGAAGC ATTCACAGCT GACGACGTGG TTTACTCTTT CGGCCTGCTG
AAAGCGAAAC CAGAACTTGA TCAACGTGGT ATCAACAAGT GGGTTACCAG CGTTGAGAAA
GTTGACGAAT ACAAAGTGCG TTTCCGTTTG TCTGAAGCAA ACTCAAACGT ACCTTATGAA
ATTTCTCTGA TCCCTATCGT TGCTGAGCAC GTGTGGAAAG ACGTGAAAGA TCCAACCACC
TTCACTAACG AAAATCCAGT AGGTACTGGT CCTTTCACCG TGATCGACAC TTTCACTCCA
CAACTGTACA TCCAGTGTCG TAACCCGAAC TACTGGGATG CCGCTAACCT AGAAGTTGAC
TGTCTGCGTG TTCCACAAAT CGCAAACAAC GACCAACTAC TGGGCAAAAT CGTTAACTCT
GAGCTCGACT GGACTTCTTC ATTCGTTCCA GATATCGACC GTACTTACGC CGCAGCGAAC
CCTAACCACC ACTACTGGTA TCCAGCAGCG GGTACTCAGG CGTTCATGGT GAACTTCAAA
AACCCAGATC CTGCGAAAAA AGAAGCACTG GATAACGTAG ATTTCCGTCG TGCGTTCTCT
ATGGCTCTGG ATCGTCAAAC CATCATTGAT ATCGCCTTCT ACGGCAGCGG TACTGTGAAC
GACTTCGCAT CTGGCCTTGG CTACGCATTC GAAGCATGGT CTGATGAAGC GACCCACAAA
AAGTACAAAG GCTTCAACAC TTATGACGTT GAAGGCTCTA AGAAGCTACT GGCAAAAGCG
GGCTTCAAAG ATGTGAACGG TGACGGTTTC GTTGAAACTC CATCAGGCAA ATCTTTTGAA
CTGCTGATCC AATCTCCAAA CGGCTGGACT GACTTTAACA ACACAGTTCA ACTGGCGGTT
GAGCAGCTAC AAGAAGTGGG TATCAAAGCG AAAGCACGTA CTCCTGAATT CGCGGTTTAT
AACCAAGCGA TGCTAGAAGG TACTTACGAC GTTGCGTATA CCAACTACTT CCACGGCGCT
GACCCATTCA CTTACTGGAA CAGCGGCTAC AACTCAGCTC TACAATCTGG CGACGGTATG
CCACGCTTTG CGATGCACTA CTTCACCGAT AAGAAGCTTG ATGGTTTGCT AGACAGCTTC
TACAAAACAG CGGACAAGAA CGAGCAGTTA GCGATCGCTC ACGGTATTCA GAAGATCATT
GCTGAAAACC AAGTGACTAT CCCTGTAATG TCTGGTGCAT GGATGTATCA GTACAACACC
ACTCGTTTCA CTGGCTGGTG GAGCGAAGAA AATCCGAAGG GCCGTCCAAG CGTTTGGGCT
GGTATCCCAG AGCGTCTACT ACACGTACTG GATCTGAAAC CAGTTAAGTA A
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| Protein sequence | MLANIKKTAL AAAVIAAATS VSAPAFARSE LTIVPDFYPT MVRNFNPYLA TNLRTTTDFI
YEPLVVFNEM KGNTPVFRLA ESYKMADDLM SVTFDIRKGV KWSDGEAFTA DDVVYSFGLL
KAKPELDQRG INKWVTSVEK VDEYKVRFRL SEANSNVPYE ISLIPIVAEH VWKDVKDPTT
FTNENPVGTG PFTVIDTFTP QLYIQCRNPN YWDAANLEVD CLRVPQIANN DQLLGKIVNS
ELDWTSSFVP DIDRTYAAAN PNHHYWYPAA GTQAFMVNFK NPDPAKKEAL DNVDFRRAFS
MALDRQTIID IAFYGSGTVN DFASGLGYAF EAWSDEATHK KYKGFNTYDV EGSKKLLAKA
GFKDVNGDGF VETPSGKSFE LLIQSPNGWT DFNNTVQLAV EQLQEVGIKA KARTPEFAVY
NQAMLEGTYD VAYTNYFHGA DPFTYWNSGY NSALQSGDGM PRFAMHYFTD KKLDGLLDSF
YKTADKNEQL AIAHGIQKII AENQVTIPVM SGAWMYQYNT TRFTGWWSEE NPKGRPSVWA
GIPERLLHVL DLKPVK
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