| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0142 |
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| Symbol | chb-1 |
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| ID | 5136454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 137659 |
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| End bp | 139572 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531602 |
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| Product | beta-N-acetylhexosaminidase |
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| Protein accession | YP_001216107 |
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| Protein GI | 147674312 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATC GAATTGAATT TGCGGTGCTC TCGGAACAAA AACCGGATTG CCGTTTTGGT
TTAACCCTGC ACAATTTGAG CGATCAAGAT CTGCATGATT GGTCGCTGTA TTTTGTGATT
GATCGTTACA TCCAACCCAT GAGTGTGACC AACGGTCAAC TGACCCAAGT CGGCAGCTTA
TGTTCGATTG TTCCAACGGA AAAAGTGTTG CAAGCTAATG GCCACTTTTA TTGTGAGTTC
ATCATCAAAA CCGCGCCTTA CCATTTCTAC ACCGATGGGG TAAAGCACGC GTTTGTCCAA
CTTAATGATA AACAGCCTGT TGAACGTATT AACGTCGCGG TTAACCCTAT CGTTCTCGCG
TCACCATTTC GCGAGCGTAG CCAGATCCCT GAAGTGACTG CGGCTGAGCT CTGTCTCATC
CCCAAACCTA ACTCACTGCA ACGTTTCCAA GGTGAGTTTG TGGTCAACCA CTCCAGCCAG
ATCTCGCTGC AATCGGACTC GGCCGCGCGT GCTGCACGCT GGTTAGAGCA AGAATTGCAT
GCACTGCATG AGTTCAAACT GAATACGGTT GGCCATAGCG ATATCGTCTA CCGCAGTAAT
CCCACGCTCG ATGAGGGCCA TTACCAACTC AATATCGAAG CGCAAGGGAT CAAGATTGAA
GCAGGCAGCC ACAGTGGCTT TATGCATGCC AGCGCGACTT TGCTGCAACT GGCGCAAGCG
CATCAAGGCT CATTGCGCTT TCCTCTGGTC AACATTGTCG ATGCACCGCG CTTTAAGTAT
CGCGGTATGA TGCTCGATTG CGCCCGCCAT TTTCACTCGC TTGAGCAGGT CAAACGAGTG
ATCAATCAAC TGGCACACTA CAAATTTAAC GTGTTCCACT GGCATCTGAC TGATGATGAA
GGTTGGCGTA TTGAGATTAA ACGCCTGCCG CAACTGACAG ACATTGGTGC ATGGCGTGGC
ATGGATGAAG TGCTGGAACC TCAGTACAGC TTACTCACCG AGCGTCATGG CGGTTTCTAT
ACCCAAGAGG AGATCCGTGC AGTGATTGAG TACGCCAGCG ATCGTGGCAT TACTGTCATC
CCTGAAATTG ACGTACCAGG GCACAGCCGC GCCGCGATTA AAGCGCTGCC GGAATGGCTG
GTCGATGAGG AAGATTGCTC GCAATATCGC AGTATTCAGT ACTACAACGA CAACGTGCTC
TCCCCTGCAC TGCCGGGCAC TTATCAATTC CTCGACATCG TATTAGAAGA AGTGGCTGCG
CTGTTTCCAA GCCAATTTAT TCATATCGGT GCCGATGAAG TTCCACACGG TGTGTGGGTA
GATAGCCCGA AATGCCAAGC CTTAATGCAA GAGCAAGGCT ATACCGACCC GAAAGAGCTG
CAAGGCCACT TACTGCGCTA CGCCGAGAAA AAACTCAAAA GCTTGGGTAA GCGTATGGTC
GGCTGGGAAG AAGCCCATCA CGGTGACAAA GTGAGTAAAG ATACGGTGAT TTACTCTTGG
TTATCGGAAA AAGCCGCCTT GGATTGCGCC AAACAAGGCT TTGACGTGAT TTTGCAGCCG
GGACAATTTA CCTATCTCGA TATCGTTCAA GACTATGCTC CTGAAGAACC GGGCGTGGAT
TGGGCAGGTG TTACTCCGCT AGAGCGTGCT TACGGTTATG AACCGTTAGC TGACGTTCCG
GCCAATAACC CACTGCGTAA ACGCATTTTA GGTATTCAAT GCGCCTTGTG GTGTGAATTG
ATCAATCACT CAGAACGCAT GGAATACATG CTCTATCCAC GTCTCACGGC ATTAGCTGAA
GGCGGTTGGA CAGAGAAATC CCAGCGTGAC TGGTTGGATT ATCTAGCGCG TTTGAAAGGC
CATTTACCAC TGCTTGATAA GCAGAAAATA CCTTATCGCG CGCCTTGGAA GTAA
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| Protein sequence | MSYRIEFAVL SEQKPDCRFG LTLHNLSDQD LHDWSLYFVI DRYIQPMSVT NGQLTQVGSL
CSIVPTEKVL QANGHFYCEF IIKTAPYHFY TDGVKHAFVQ LNDKQPVERI NVAVNPIVLA
SPFRERSQIP EVTAAELCLI PKPNSLQRFQ GEFVVNHSSQ ISLQSDSAAR AARWLEQELH
ALHEFKLNTV GHSDIVYRSN PTLDEGHYQL NIEAQGIKIE AGSHSGFMHA SATLLQLAQA
HQGSLRFPLV NIVDAPRFKY RGMMLDCARH FHSLEQVKRV INQLAHYKFN VFHWHLTDDE
GWRIEIKRLP QLTDIGAWRG MDEVLEPQYS LLTERHGGFY TQEEIRAVIE YASDRGITVI
PEIDVPGHSR AAIKALPEWL VDEEDCSQYR SIQYYNDNVL SPALPGTYQF LDIVLEEVAA
LFPSQFIHIG ADEVPHGVWV DSPKCQALMQ EQGYTDPKEL QGHLLRYAEK KLKSLGKRMV
GWEEAHHGDK VSKDTVIYSW LSEKAALDCA KQGFDVILQP GQFTYLDIVQ DYAPEEPGVD
WAGVTPLERA YGYEPLADVP ANNPLRKRIL GIQCALWCEL INHSERMEYM LYPRLTALAE
GGWTEKSQRD WLDYLARLKG HLPLLDKQKI PYRAPWK
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