Gene VC0395_A0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0140 
Symbol 
ID5137229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp133600 
End bp135012 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content49% 
IMG OID640531600 
Productputative phosphoglucomutase/phosphomannomutase 
Protein accessionYP_001216105 
Protein GI147673470 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAT TTGGTACTGG CGGCTGGCGT GCGTTTATTG GTGAAGAATT CACTAAAGAT 
AATGTGCGCT TGGTGGCTCA AGCGTTAGCC AACATCATCC ATCATGAGCA AGCCGCAAAC
GAAGGCTTCG TAATTGGTTA CGACCGCCGT TTTCTGTCAG ACAAAGCGGG ACGCTGGTTT
GCCGAAGTGT TAGCCGCGAA TGGCGTTGTG GTGAGCTTTA TCGACAAGTT TGTGCCAACA
CCGGTGGTGA TGTTTAAAGC CAAAGCGATG GATTGTGCTT ATTCAGCCTG TATTACCGCC
TCGCACAACC CGGCCGACTA CAACGGCATC AAAGTGTTTA TCCGTGGTGG CCGTGATGCA
GATGAAGTGA TCACTCAGAA GATCGAGCAG CAAATTGCCA CACTGACTTT ACAAGACGTG
AAATCGATCG ACTTTGATCA AGCCGTCAAC GACAAACTGA TCGCCATCAT CAACCCGATG
AACGAGTTCG TCGACAGCAT CATCAACTTC ATCGATATTG AAGCGATCAA AAAAGCCAAT
CTACGAGTGT TGATCGACCC TATGTTCGGG GTGGCGAAAA ACGCGCTGCA AACGGTACTG
ATCAATGGCC GCTGCGACGT GGACGTGATC AACGATGGCA AAAACCCTGA TTTCGGTGGT
TTGATGCCTT CGCCTAGCGC TGCCACCTTG TATCGCTTGA AGCATCTGGT GAAACACGAA
GGTTATGACA TCGGTATCGG CACCGATGGC GATGCGGACC GCCTTGGCAT CATCGATGAA
AAAGGCAACT TTATTCACCC GAACGAAGTG CTGATCCTGC TTTACTACTA CCTGCTGGAG
TACAAAGGCT GGAAAGGTTC TGTGGTGCGT AACATCGCAA CCACACATCT GTTGGATAAG
ATCGCCGCCG ATCATGGTGA GCGGTGCTTT GAAGTGCCTG TGGGCTTTAA ACACATCTCT
TCACAAATGG AAGCGGACGA CTCTCTGATT GGCGGGGAGA GCTCTGGCGG CCTCACGATT
CGTGGTCACA TCAAGGGGAA AGATGGCGTG TTCGCTTCTA GCCTATTGGT GGAAATGATC
AGCGTGACGG GCAAGAAACT CTCTGAGCTG TTAACCGAGA TCTATGATCG TTACGGCTAT
GCCTACACTG CGGAAGGCGA TTGCAAATTT AAGCCCGCCC AGCGTGATGA GATCTACAAC
AAGGCCTACA TTGAGAAAAA ACTGCCTGAG TTTGAATTCG ACATCGATAA AGTCAGCTAT
GAAGATGGGG CGAAAGTCTA CTTCAAGAAC GGTGGCTGGG TAATTGCCCG CTTCTCCGGT
ACTGAACCTT TATTACGTAT TTTCGCCGAA ATGGCCGACA AAGATACTGC GGAGCGTGTT
CTTCAACAGA TGAAAGCTTT CTTGGCGTTG TAA
 
Protein sequence
MIKFGTGGWR AFIGEEFTKD NVRLVAQALA NIIHHEQAAN EGFVIGYDRR FLSDKAGRWF 
AEVLAANGVV VSFIDKFVPT PVVMFKAKAM DCAYSACITA SHNPADYNGI KVFIRGGRDA
DEVITQKIEQ QIATLTLQDV KSIDFDQAVN DKLIAIINPM NEFVDSIINF IDIEAIKKAN
LRVLIDPMFG VAKNALQTVL INGRCDVDVI NDGKNPDFGG LMPSPSAATL YRLKHLVKHE
GYDIGIGTDG DADRLGIIDE KGNFIHPNEV LILLYYYLLE YKGWKGSVVR NIATTHLLDK
IAADHGERCF EVPVGFKHIS SQMEADDSLI GGESSGGLTI RGHIKGKDGV FASSLLVEMI
SVTGKKLSEL LTEIYDRYGY AYTAEGDCKF KPAQRDEIYN KAYIEKKLPE FEFDIDKVSY
EDGAKVYFKN GGWVIARFSG TEPLLRIFAE MADKDTAERV LQQMKAFLAL