Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0131 |
Symbol | mrcB |
ID | 5136016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 119547 |
End bp | 121880 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640531591 |
Product | penicillin-binding protein 1B |
Protein accession | YP_001216096 |
Protein GI | 147674464 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGAA AAAGTAGTAA CAGATCGCGT GGCCGTAAAG CGCGCAGTGG TAAAAGTGCC TCTTCCTCCA AGCTGCAAAT CTGGCTGGGA AGGATTTGGA GTATCGGCTG GAAATTAGCG CTGACGCTGG CCGCAGTGCT GGTTTTTATT GGTATCTATC TCGATTCGAT GATCAAACAG CGCTTTGAAG GTCAGCTGTT TGATCTGCCG ACCGTGGTCT ATGCCCGTAT TTTAACGCTT GAGCCCGGCA ACGGCCTCAG TTTGCAAGAA CTGCGCAATG AGCTGGATGT CCTCAATTAC CGCAAAGTGG CACAGCCCCG TTTCCCCGGT GAATACGCGT CTTCTTCCAG TCGAATTGAG CTGATCCGCC GTCCGTTTGA ATTCGCGGAT GGTCCAGAGC CGGATCGCCG AGTGATGCTT ACCTTTGATG GCAGTGGTTT GAACAAAATC GAATCATTAG AGCAAAAACG CGAGCTAGGC TACCTGCGTT TAGAGCCAAA ACTGATGGGC ATGCTGGAAA AAGATTCGCC GGAGCAGCGA CTCTTTTTAC GTCGCGATCA ATTCCCCGAA GTGTTGGTTG ATGCACTCTT AGTCACCGAA GATCGTGATT TTTATCAGCA CGATGGCGTA TCACCACTTG CGATTGGTCG CGCTATGGTG GTCAACCTTA AAGCGGGGCG CACGGTGCAA GGGGGCAGTA CCTTGACCCA GCAGCTGGCT AAAAACATCT TCCTTTCTAG CGATCGCACC TTGTGGCGTA AGCTGCGCGA AGCCTATATG GCGCTGATCA TCGATTATCG TTACAGCAAA GATCGTATTC TTGAAGCCTA TCTTAACGAA GTTTATTTAG GGCAAAGTGG CGCAGATGCG ATCCACGGTT TTGGTCTGGC TTCACGGCTC TATTTTGGTC AGCCGCTGCA AGAGCTACGG ATTGATCAAT TGGCATTGTT GGTTGGCATG GTTAAAGGGC CTTCTTATTA CAACCCGATG CGTTATGCCG AGCGCGCTCG CGAGCGGCGC GATCTGGTGC TGAAACTGAT GATGGAGCAC GATATTCTGA CGGCGCCAGA GTACCAGCAA GCGGTAACTC GTCCGTTGGA TGTGCAGAAA ACCGCGCAAA TCGCTAGCCG TCAGCCAGCG TATTTCCAGC AAGTTTCTAT TGAGCTGAAA GAAAAACTGG GCGACAAATT TAAAGCGGAT TCAGGATTGC GGGTGTTTAC CTCGCTCGAT CCGGTTTCGC AGTCCAAACT CGAGCAAGCG ATCCACGATC AGATCCCGCA ATTAGCGAAA ACCGCAGGCA AAGATCTCGA AGCCGCTGCG ATCGCTGTGG ATCGTCATAG TGGCGAAATT CGTGCCATGG TCGGCGGTAA GCGAACCGGT TACGATGGTT TTAACCGCGT GCTCAATGCC AGTCGACAAA TTGGTTCACT GGTGAAACCA GCGGTGTATC TCACGGCGTT AGCGCATCCC GATCAGTACA ACCTAGCCAC TACACTGGAA GATAAACCAC TCACCTTAAA AGGCAGTGAA GGCAGCGCGT GGACTCCGCG AAACTACGAT CGTCAATATC GTGGAGAGGT GCCCCTTTAT TTGGCGCTCG CTCAATCGCT TAATGTGCCG ACCGTGGCTT TGGGGATGAA GCTTGGGATT GATCAAGTCT CAGCAACCTT GGGTAAGCTC GGCGTGAATC GCGACGAAAT TCGCCCTGTC CCTTCGATGT TGCTCGGTTC ATTCTCACTC ACGCCATATC AAGTGGCGCA GATGTATCAA ACGTTGACCA ATTCCGGCAA AAAAGCCCCG CTGTCAGCGC TACGTTCTGT GCTCGATTTG GAAGGCAATG TGCTGTATGA ATCTCTGCCG AGAGTGTCAC AAGCGGTGGA TCAGCAAGCC GCTTGGCTGA CGACTTACGC GATGAAACAA GGGGTGCAAG AGGGGACTGG ACGTTACTTG AATGCGCAGT TCAGCAGTGC AGCACTGGCG GGGAAAACCG GGACCACTAA CGATAACCGT GACAGTTGGT TTGTGGGGGT CGATGGCCGT GAAGTGACCA CCATTTGGCT TGGCCGCGAT GATAACCAGC CAACGAAGCT CACTGGCGCG AGTGGGGCAT TACGTGTTTA TGCGCAGTAT TTGAAATATC GCATTCCAGA GAAATTACAG TTACCTTGGC CAGAAGGCAT AACGACCTTC GGCTTTGCCA AGCAGACGCA AGGTGGATTG AAACTCGACT GTGATAATGC GTTTAAACTG CCTATTTGGG ACAATCAACA GCAGTTAAAA CAGCAGTGTG AAAACCGTCC GACCGAGTGG ATCAAAAAGC TGTTTGAGTG GTAA
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Protein sequence | MTRKSSNRSR GRKARSGKSA SSSKLQIWLG RIWSIGWKLA LTLAAVLVFI GIYLDSMIKQ RFEGQLFDLP TVVYARILTL EPGNGLSLQE LRNELDVLNY RKVAQPRFPG EYASSSSRIE LIRRPFEFAD GPEPDRRVML TFDGSGLNKI ESLEQKRELG YLRLEPKLMG MLEKDSPEQR LFLRRDQFPE VLVDALLVTE DRDFYQHDGV SPLAIGRAMV VNLKAGRTVQ GGSTLTQQLA KNIFLSSDRT LWRKLREAYM ALIIDYRYSK DRILEAYLNE VYLGQSGADA IHGFGLASRL YFGQPLQELR IDQLALLVGM VKGPSYYNPM RYAERARERR DLVLKLMMEH DILTAPEYQQ AVTRPLDVQK TAQIASRQPA YFQQVSIELK EKLGDKFKAD SGLRVFTSLD PVSQSKLEQA IHDQIPQLAK TAGKDLEAAA IAVDRHSGEI RAMVGGKRTG YDGFNRVLNA SRQIGSLVKP AVYLTALAHP DQYNLATTLE DKPLTLKGSE GSAWTPRNYD RQYRGEVPLY LALAQSLNVP TVALGMKLGI DQVSATLGKL GVNRDEIRPV PSMLLGSFSL TPYQVAQMYQ TLTNSGKKAP LSALRSVLDL EGNVLYESLP RVSQAVDQQA AWLTTYAMKQ GVQEGTGRYL NAQFSSAALA GKTGTTNDNR DSWFVGVDGR EVTTIWLGRD DNQPTKLTGA SGALRVYAQY LKYRIPEKLQ LPWPEGITTF GFAKQTQGGL KLDCDNAFKL PIWDNQQQLK QQCENRPTEW IKKLFEW
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