Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0115 |
Symbol | |
ID | 5135720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 103351 |
End bp | 103749 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531575 |
Product | hemagglutinin/protease regulatory protein |
Protein accession | YP_001216080 |
Protein GI | 147673716 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTCGTC AGTACTCCAA CTTCTTGACC GATCACATCG ATCTTGATTT GGATGTGAAA ACCAACCTAC AAACTCTGTG CAAAGAGATG GTGAAATTGG CGATGACCGA TTGTCACTGG CTCAAAGTCT GGTTTGAGTG GAGTGCTTCA ACCCGTGACG AAGTTTGGCC ACTGTTTGTT TCCACCAACC GAACTAACCA ACTGCTGATC AGAAACATGT TTATGAAAGC GATGGAGCGT GGCGAATTGT GTGAGAAACA CGATGTCGAT AACATGGCCA GCCTGTTCCA CGGCATCTTC TACTCCATCT TCTTACAAGT GAACCGTTTA GGTGAACAAG AAGCAGTGTA TAAGTTGGCC GATAGCTACC TCAATATGCT GTGTATCTAT AAGAACTAG
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Protein sequence | MVRQYSNFLT DHIDLDLDVK TNLQTLCKEM VKLAMTDCHW LKVWFEWSAS TRDEVWPLFV STNRTNQLLI RNMFMKAMER GELCEKHDVD NMASLFHGIF YSIFLQVNRL GEQEAVYKLA DSYLNMLCIY KN
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