Gene VC0395_A0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0115 
Symbol 
ID5135720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp103351 
End bp103749 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID640531575 
Producthemagglutinin/protease regulatory protein 
Protein accessionYP_001216080 
Protein GI147673716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCGTC AGTACTCCAA CTTCTTGACC GATCACATCG ATCTTGATTT GGATGTGAAA 
ACCAACCTAC AAACTCTGTG CAAAGAGATG GTGAAATTGG CGATGACCGA TTGTCACTGG
CTCAAAGTCT GGTTTGAGTG GAGTGCTTCA ACCCGTGACG AAGTTTGGCC ACTGTTTGTT
TCCACCAACC GAACTAACCA ACTGCTGATC AGAAACATGT TTATGAAAGC GATGGAGCGT
GGCGAATTGT GTGAGAAACA CGATGTCGAT AACATGGCCA GCCTGTTCCA CGGCATCTTC
TACTCCATCT TCTTACAAGT GAACCGTTTA GGTGAACAAG AAGCAGTGTA TAAGTTGGCC
GATAGCTACC TCAATATGCT GTGTATCTAT AAGAACTAG
 
Protein sequence
MVRQYSNFLT DHIDLDLDVK TNLQTLCKEM VKLAMTDCHW LKVWFEWSAS TRDEVWPLFV 
STNRTNQLLI RNMFMKAMER GELCEKHDVD NMASLFHGIF YSIFLQVNRL GEQEAVYKLA
DSYLNMLCIY KN