| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0100 |
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| Symbol | htrA |
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| ID | 5135611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 90423 |
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| End bp | 91793 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531560 |
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| Product | protease DO |
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| Protein accession | YP_001216065 |
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| Protein GI | 147673156 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000901293 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AACCTTTACT TGTTTTAACT GCTCTGTCTC TTAGTTTGAG CGCGATTCTC
TCGCCTTTGC CTGCAACTGC AGCGCTTCCT CTCTCAGTCA ATGGAGAGCA GATTCCTAGC
CTAGCCCCCA TGCTTGAAAA AGTCACACCC GCCGTGGTGA GCATTGCTGT GGAAGGGACT
CAAGTTTCAA GACAGCGTCT GCCGGATCAG TTTCGTTTTT TCTTCGGACC GGATTTTCCG
ACCGAACAAC TCCAAGAGCG ACCTTTCCGT GGCTTAGGTT CTGGGGTCAT CATTAACGCT
GATAAAGGGT ATGTCGTCAC TAACTACCAT GTCATTAATG GTGCTGAAAA AATTCGCGTC
AAACTGTATG ACGGTCGCGA GTTTGATGCA GAACTTGTCG GTGGTGATGA GATGTCTGAT
GTCGCCTTGC TCAAGCTAAA CAAAGCGAAA AACCTCACTG AGATCCGTAT CGCGGACTCC
GATAAACTGC GAGTCGGTGA TTTTGCAGTG GCCATCGGTA ACCCATTTGG CTTAGGGCAA
ACTGTGACCT CTGGCATTGT CTCAGCCTTA GGGCGTAGTG GTTTGAATAT CGAAAACTTT
GAAAACTTCA TCCAGACCGA TGCCGCCATC AACAGCGGCA ACTCAGGAGG AGCTCTGGTT
AACCTTAATG GTGAACTCAT CGGTATCAAC ACCGCGATCC TTGGTCCAAA CGGTGGCAAC
GTCGGTATAG GTTTTGCCAT CCCATCGAAT ATGATGAAAA ATCTGACCGA TCAAATTCTT
GAGTTTGGTG AAGTGAAACG CGGCATGCTG GGTGTACAAG GCGGTGAAAT CACTTCCGAA
CTGGCTGATG CGCTCGGCTA TGAATCCTCA AAAGGTGCTT TTGTCAGCCA AGTGGTTCCT
GACAGTGCTG CGGACAAAGC GGGCATCAAA GCGGGTGACA TCATTACGTC GCTGAATGGT
AAAAAAATCG ATACCTTCTC TGAGCTACGC GCGAAAGTCG CGACCCTAGG CGCAGGAAAA
ACCATTACCC TTGGAGTGCT GCGTGATGGT AAGAATCAAA ATATTGATGT AACGCTTGGG
GAGCAGCAAA ATGCCAAGAC CAAAGCAGAA TCACTGCATC AAGGTTTGAG CGGCGCGGAG
TTAAGCAACA CCACTGACAG CGATCCTATT CAGGGCGTTA AGGTTACTGA GGTTCAAAAA
GGCTCTGCCG CTGAATCTTA CCAGCTACAA AAAGACGACA TTATCATTGG CGTTAACCGT
AAGCGGGTGA AAAATATCGC CGAGTTGCGT GCGATTATGG AAAAATCACC GAATATTTTG
GCATTAAATA TCCAACGTGG AGAGAGAACG CTTTACTTGG TTGTTCGTTA A
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| Protein sequence | MMKKPLLVLT ALSLSLSAIL SPLPATAALP LSVNGEQIPS LAPMLEKVTP AVVSIAVEGT
QVSRQRLPDQ FRFFFGPDFP TEQLQERPFR GLGSGVIINA DKGYVVTNYH VINGAEKIRV
KLYDGREFDA ELVGGDEMSD VALLKLNKAK NLTEIRIADS DKLRVGDFAV AIGNPFGLGQ
TVTSGIVSAL GRSGLNIENF ENFIQTDAAI NSGNSGGALV NLNGELIGIN TAILGPNGGN
VGIGFAIPSN MMKNLTDQIL EFGEVKRGML GVQGGEITSE LADALGYESS KGAFVSQVVP
DSAADKAGIK AGDIITSLNG KKIDTFSELR AKVATLGAGK TITLGVLRDG KNQNIDVTLG
EQQNAKTKAE SLHQGLSGAE LSNTTDSDPI QGVKVTEVQK GSAAESYQLQ KDDIIIGVNR
KRVKNIAELR AIMEKSPNIL ALNIQRGERT LYLVVR
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