Gene VC0395_A0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0095 
SymbolrpsP 
ID5136295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp87071 
End bp87319 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content49% 
IMG OID640531555 
Product30S ribosomal protein S16 
Protein accessionYP_001216060 
Protein GI147674693 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000315992 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACCA TTCGTTTGGC ACGTCACGGC GCGAAAAAGC GTCCATTCTA TCAAATCGTT 
GTAGCTGACA GCCGCAACTC AGCAACTGGC CGTTTCATCG AGAAAGTAGG TTTCTTTAAC
CCTACTGCTA CTGGTCAAGA AGAAGGCCTG CGTCTAGACC TAGATCGCGT GAACCACTGG
GTTTCACAAG GCGCATCTCT GTCTGATCGC GTAGCACAGC TAGTTAAAAC CGCTCAAAAA
GCGGCTTAA
 
Protein sequence
MVTIRLARHG AKKRPFYQIV VADSRNSATG RFIEKVGFFN PTATGQEEGL RLDLDRVNHW 
VSQGASLSDR VAQLVKTAQK AA