| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0094 |
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| Symbol | ffh |
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| ID | 5135199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 85450 |
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| End bp | 86835 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531554 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001216059 |
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| Protein GI | 147674906 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000225089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGA ATTTAACCGA TCGATTGTCC AAAACGCTGA AAAATATCAG CGGCAAAGGT
CGTCTTACTG AAGACAACAT TAAAGATACC CTGCGCGAAG TGCGCATGGC GCTGTTAGAG
GCGGACGTTG CGCTGCCTGT CGTTCGTGAT TTCGTCAATC GCGTTAAAGA AGGCGCGGTG
GGGGTCGAGG TTTCCAAATC TCTGACTCCG GGTCAAGAGT TCATCAAAAT CGTCCGCCAG
CAACTTGAAG CTGTGATGGG CGAATCCAAC GAAGCGTTGA ATCTTGCCGC TCAGCCTCCA
GCGGTTATTT TGATGGCTGG TTTGCAAGGT GCGGGTAAAA CCACATCCGT AGGCAAACTC
TCTAAGCTCC TAAAAGAGCG TGATAAGAAG AAAGTGTTGG TGGTTTCCGC CGACGTGTAT
CGCCCAGCGG CGATCAAGCA GCTCGAAACA TTAGCCAATG ATTTAGGCGT TGATTTCTTC
CCGTCCACAC CGGATCAAAA ACCGATTGAT ATCGCTAACG CTGCAATTGA TCACGCTAAG
AAGAAATTCT ACGACGTACT GATTGTCGAT ACCGCAGGTC GTTTGGCGAT TGATGAGCAG
ATGATGGCGG AGATCCAAGC GCTGCATAAA GCGATCAATC CGGTTGAAAC CCTGTTCGTG
GTCGATGCCA TGACGGGTCA AGATGCCGCC AATACCGCGA AAGCGTTTGG TGATGCATTG
CCACTGACCG GGGTGATTCT AACCAAGGTC GATGGTGATG CCCGTGGCGG TGCGGCGTTG
TCGGTACGCC ATATTACCGG TAAACCGATT AAATTTATCG GTGTCGGCGA GAAAACCGAT
GCCTTAGAGC CTTTCCATCC GGATCGTATT GCTTCACGCA TTCTTGGTAT GGGCGATGTA
CTGTCGCTGA TCGAAGATCT GCAGCGCAAT GTTGACCAAG AGAAAGCCGA AAAACTCGCG
AAAAAATTCA AAGAGAAGAA AGGCTTTGAT TTAGAAGACT TTCGTGAGCA GTTAGGTCAG
ATGAAAAACA TGGGCGGCAT GATGGGGATG CTCGATAAAC TGCCCGGAAT GTCTCAACTG
CCTGCGGATA TGAAAGACAA AGTGGATGAT CGCGTTTTCA AACAGATGGA AGCCATCATC
AACTCAATGA CCATGAAAGA GCGTCAAAAC CCAGACCTCA TCAAAGGCTC ACGCAAAAAG
CGGATTGCTG CGGGTTCCGG TACCCAAGTG CAAGACGTAA ACCGCCTGCT CAAGCAATTT
ACCCAGATGC AGAAGATGAT GAAGAAAATG CAACAAGGTG GCATGAAAGG CATGATGCGT
AACATGCAAG GCCTGATGGG CGGCGGTGGC CGTGGTGGTT TCGGCGGCGG TTTCTTCGGT
CGTTAA
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| Protein sequence | MFENLTDRLS KTLKNISGKG RLTEDNIKDT LREVRMALLE ADVALPVVRD FVNRVKEGAV
GVEVSKSLTP GQEFIKIVRQ QLEAVMGESN EALNLAAQPP AVILMAGLQG AGKTTSVGKL
SKLLKERDKK KVLVVSADVY RPAAIKQLET LANDLGVDFF PSTPDQKPID IANAAIDHAK
KKFYDVLIVD TAGRLAIDEQ MMAEIQALHK AINPVETLFV VDAMTGQDAA NTAKAFGDAL
PLTGVILTKV DGDARGGAAL SVRHITGKPI KFIGVGEKTD ALEPFHPDRI ASRILGMGDV
LSLIEDLQRN VDQEKAEKLA KKFKEKKGFD LEDFREQLGQ MKNMGGMMGM LDKLPGMSQL
PADMKDKVDD RVFKQMEAII NSMTMKERQN PDLIKGSRKK RIAAGSGTQV QDVNRLLKQF
TQMQKMMKKM QQGGMKGMMR NMQGLMGGGG RGGFGGGFFG R
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