| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0092 |
|---|
| Symbol | |
|---|
| ID | 5135849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 83080 |
|---|
| End bp | 84360 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640531552 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001216057 |
|---|
| Protein GI | 147673693 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0306325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGACA TATCAACGGG TATCTTATTT GCGCTACTCG CGTGTCTCAT CATTATTTCC
GCCTATTTCT CCGGTTCTGA AACCGGCATG ATGGCTCTCA ACCGTTACCG TTTAAAGCAT
TTGGCCAACA GCGACCATAA AGGTGCTAAA CGTGTTGAAA AGCTACTGGA TCGTCCAGAT
CGTTTGATTG GCTTAATCCT GATTGGTAAC AACCTCGTCA ATATCCTCGC CTCTGCGATT
GCCACCATTA TCGGTATGCG CCTGTATGGC GATTTAGGTG TCGCAATTGC CACGGGGGCC
TTAACTTTAG TGATTCTGGT GTTTGCCGAA GTCACGCCTA AAACTCTAGC CGCGCTTTAC
CCAGAGCGAG TCTCTTACGC CAGCAGCGTG TTACTGACGA TTTTGATGAA GCTGCTTTCA
CCTTTGGTGC TGTTCGTTAA CTTGATGACC AATGGCTTGA TCCGCATTCT CGGCATCTCA
CCGAAACATG GCAAAGGCGA TCATTTAAGC TCAGAAGAGT TACGTACTGT GGTTAATGAA
GCGGGAGGAC TCATCCCTCG CCGCCACCAA GATATGCTGC TGTCGATCCT CGATTTAGAA
CACGTCACCG TCAACGACAT CATGATCCCG CGTAATGAGA TAACGGGGAT CAATATCAAT
GATGATTGGA AGTCGATTGT GCGTCAGTTA GTCCATTCAC CACATGGGCG AGTCGTACTG
TACCGTGACA AGATTGACGA AGTGGTCGGG ATTTTGCGTT TACGTGAAGC CTCACGCTTT
ATGCTTGAGA AGAACGACTT TAACAAAGAG ATGCTGCTGC GCGCTGCGGA TGAGATTTAC
TTTATCCCTG AAGGTACACC GCTTAACGTT CAGCTGCTCA AATTCCAACG TAATAAAGAA
CGCATTGGTT TAATCGTGGA TGAATACGGT GAAATCATTG GTTTAACCAC GCTCGAAGAT
ATTTTGGAAG AGATTGTCGG TGAATTTACC ACATCCATGT CTCCAAGCTT GGCCGATGAA
ATTACTCCAC AAGGTGATGG CAGTTTCTTG ATTGAAGGCA GCGCCAATAT TCGTGACATT
AACAAGAGCC TGAAATGGAA GCTTCCTACC GATGGACCAC GAACCTTAAA CGGTTTGATT
TTGGAGCACC TTGAAGAGAT CCCAGCGAGC CATCTGAGTG TGAAAGTGGC ACAGCACAAA
ATGGAAATCC TCGAGCTGGA AGAGAATCGG ATTAAGTTGG TCAAAGTTTA CCCAAGAAAA
ACCAAAGTCA GCTTGGTTTA A
|
|---|
| Protein sequence | MDDISTGILF ALLACLIIIS AYFSGSETGM MALNRYRLKH LANSDHKGAK RVEKLLDRPD
RLIGLILIGN NLVNILASAI ATIIGMRLYG DLGVAIATGA LTLVILVFAE VTPKTLAALY
PERVSYASSV LLTILMKLLS PLVLFVNLMT NGLIRILGIS PKHGKGDHLS SEELRTVVNE
AGGLIPRRHQ DMLLSILDLE HVTVNDIMIP RNEITGININ DDWKSIVRQL VHSPHGRVVL
YRDKIDEVVG ILRLREASRF MLEKNDFNKE MLLRAADEIY FIPEGTPLNV QLLKFQRNKE
RIGLIVDEYG EIIGLTTLED ILEEIVGEFT TSMSPSLADE ITPQGDGSFL IEGSANIRDI
NKSLKWKLPT DGPRTLNGLI LEHLEEIPAS HLSVKVAQHK MEILELEENR IKLVKVYPRK
TKVSLV
|
|---|
| |