| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0063 |
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| Symbol | mutS |
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| ID | 5135925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 56617 |
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| End bp | 59205 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531523 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_001216036 |
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| Protein GI | 147675773 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAT CGAACGCCTC ACCGAGCGAG TCTCTTTCGC ACCACACCCC GATGATGCAA
CAGTATTTAA GACTCAAGGC GGAAAACCCA GACATTCTGC TGTTCTATCG CATGGGTGAT
TTTTACGAAC TGTTTTATGA CGATGCCAAA CGCGCCTCTG AACTGCTAGA TATTTCCTTA
ACCAAACGCG GCGCATCGGC GGGTGAACCC ATTCCTATGG CGGGTGTGCC TTTCCATGCC
GTGGAAGGTT ATTTGGCGAA ACTCGTCCAG ATGGGGGAAT CGGTCGCGAT CTGCGAACAG
ATTGGCGATC CAGCCACCAG CAAAGGCCCC GTTGAGCGCA AAGTAGTGCG GATTGTGACA
CCGGGAACGG TGACCGATGA AGCCCTGCTC TCAGAGCGAG TCGATAACCT GATCGCGGCG
ATTTATCACC ATAACGGCCG CTTTGGTTAT GCAACCATGG ATATCACCTC CGGTCGTTTT
CAGCTCAGTG AGCCGCAAAC CGAAGAAGAG ATGGCCGCCG AGCTGCAACG CACTTCGCCT
CGTGAACTCT TGTTTCCTGA AGATTTTTCG CCAGTGCATC TAATGGCAAG CCGCCAAGGC
AACCGCCGTC GCCCGATTTG GGAATTTGAA CTCGATACCG CGAAACAGCA GCTCAACCAG
CAATTTGGCA CGCGCGATCT GGTTGGCTTT GGGGTTGAGC AAGCAAAACT TGGCTTGTGC
GCAGCAGGCT GCTTGATCCA ATACGTCAAA GATACTCAGC GTACCGCTTT GCCACACATT
CGTTCACTGA CTTGGGATCG CCAAGATCAA TCGGTGATTT TGGATGCCGC GACGCGGCGC
AACCTTGAAC TCACTCATAA CTTGGCGGGT GGAACAGATA ACACGCTTGC AGAAGTACTC
GACCATTGTG CTACCCCCAT GGGCAGCCGC ATGCTCAAAC GTTGGATCCA CCAACCGATG
CGCGATAACG CCACTCTCAA TCAGCGTTTA GATGCGATCA CTGAGCTCAA AGAAACCGCT
TTGTATGGGG AACTGCATCC CGTGCTCAAA CAGATTGGCG ATATTGAACG GATCCTCGCC
CGTCTAGCGC TGCGTTCAGC GCGGCCGCGC GATTTAGCTC GCCTACGCCA TGCCATGCAG
CAGTTACCTG AATTGCACTC GGTCATGAGC GAGCTTAAGC AGCCTCACCT TACCGAGCTA
CGCACCCATG CCGAGCCAAT GGATGAATTG TGCGATTTAC TCGAACGTGC GATCAAAGAA
AACCCACCCG TGGTGATCCG CGATGGTGGC GTGATCGCCG ATGGTTACAG TGCCGAACTC
GATGAATGGC GCGATTTAGC CAATGGCGCA ACCGAATTTC TGGAACGCTT GGAAGCCGAA
GAGCGCGATC GTCACGGCAT TGATACCCTG AAAGTGGGTT ATAACAATGT GCACGGTTTC
TACATTCAAG TGAGCCGGGG TCAGAGCCAT TTAGTGCCTC CCCACTATGT ACGCCGTCAA
ACCTTAAAAA ATGCTGAGCG TTACATCATC GAAGAACTTA AACAGCATGA AGATAAAGTG
CTCAATTCTA AGTCTCGTGC TTTAGCGTTA GAAAAACAGC TGTGGGAAGA GTTGTTCGAT
TTGCTGATGC CGCATCTTGA GCAGCTGCAA CAACTGGCGG CTTCCGTTGC TCAATTGGAT
GTGCTGCAAA ACCTCGCAGA GCGCGCAGAA AACTTGGAAT ATTGTCGCCC AACGCTGGTT
CAAGAAGCGG GCATTCACAT CCAAGGTGGT CGCCACCCTG TGGTAGAGCG AGTAATGAAT
GAGCCGTTTA TCGCCAACCC GATCGAACTT AATCCACAGC GACGCATGCT GATCATTACT
GGTCCGAATA TGGGCGGTAA ATCGACTTAC ATGCGTCAAA CCGCCTTGAT TGCACTGATG
GCGCATATCG GTAGTTATGT GCCGGCTGAA AGTGCGTCAA TCGGCCCACT AGATCGTATT
TTTACCCGTA TCGGCGCGTC CGATGATCTT GCGTCCGGCC GCTCAACCTT TATGGTGGAG
ATGACGGAAA CCGCCAATAT TTTGCACAAT GCGACCCGTA ACAGTTTGGT GTTGATGGAT
GAGATTGGCC GCGGTACCAG TACTTATGAC GGACTCTCGC TCGCTTGGGC GAGTGCCGAG
TGGCTTGCCA AAGAGATTGG TGCCATGACG CTGTTTGCTA CTCACTATTT TGAGTTAACC
GAACTGCCGA ATGTGTTACC TCATCTAGCG AATGTTCATT TAGATGCGGT TGAACATGGT
GATGGCATCG CCTTTATGCA CGCAGTGCAA GAGGGTGCCG CGAGTAAATC GTATGGTTTA
GCCGTAGCAG GACTGGCTGG CGTACCCAAG CCCGTGATTA AAAATGCGCG CGCCAAATTA
CAACAACTTG AGCTATTAAG CTCACAACCT GCCGAGACTC GTAAGCCAAG CCGCGTCGAT
ATTGCCAACC AGCTGAGCTT AATTCCTGAG CCGAGTGCTG TTGAGCAAGC CTTGGCAGGC
GTAGATCCTG ACCAGCTCAC TCCTCGCCAA GCTCTAGATA TGCTCTATCA ATTGAAAAAG
CTGCTCTAG
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| Protein sequence | MMKSNASPSE SLSHHTPMMQ QYLRLKAENP DILLFYRMGD FYELFYDDAK RASELLDISL
TKRGASAGEP IPMAGVPFHA VEGYLAKLVQ MGESVAICEQ IGDPATSKGP VERKVVRIVT
PGTVTDEALL SERVDNLIAA IYHHNGRFGY ATMDITSGRF QLSEPQTEEE MAAELQRTSP
RELLFPEDFS PVHLMASRQG NRRRPIWEFE LDTAKQQLNQ QFGTRDLVGF GVEQAKLGLC
AAGCLIQYVK DTQRTALPHI RSLTWDRQDQ SVILDAATRR NLELTHNLAG GTDNTLAEVL
DHCATPMGSR MLKRWIHQPM RDNATLNQRL DAITELKETA LYGELHPVLK QIGDIERILA
RLALRSARPR DLARLRHAMQ QLPELHSVMS ELKQPHLTEL RTHAEPMDEL CDLLERAIKE
NPPVVIRDGG VIADGYSAEL DEWRDLANGA TEFLERLEAE ERDRHGIDTL KVGYNNVHGF
YIQVSRGQSH LVPPHYVRRQ TLKNAERYII EELKQHEDKV LNSKSRALAL EKQLWEELFD
LLMPHLEQLQ QLAASVAQLD VLQNLAERAE NLEYCRPTLV QEAGIHIQGG RHPVVERVMN
EPFIANPIEL NPQRRMLIIT GPNMGGKSTY MRQTALIALM AHIGSYVPAE SASIGPLDRI
FTRIGASDDL ASGRSTFMVE MTETANILHN ATRNSLVLMD EIGRGTSTYD GLSLAWASAE
WLAKEIGAMT LFATHYFELT ELPNVLPHLA NVHLDAVEHG DGIAFMHAVQ EGAASKSYGL
AVAGLAGVPK PVIKNARAKL QQLELLSSQP AETRKPSRVD IANQLSLIPE PSAVEQALAG
VDPDQLTPRQ ALDMLYQLKK LL
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