Gene VC0395_A0053 details

Gene Information

• Locus tag: VC0395_A0053
• Symbol: folK-1
• ID: 5137855
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 49147
• End bp: 49653
• Gene Length: 507 bp
• Protein Length: 168 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640531513
• Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
• Protein accession: YP_001216026
• Protein GI: 147673898
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
• TIGRFAM ID: [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.354384
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCG CTTATATTGG TGTGGGCTCA AATCAGGATC GCCATCAGTC GATTGAAGCT 
GGCCTTCGTG CATTAGCCGA GCTGGCGAGC CAGTGGCGTC TGTCCACGAT TTATGAGTGT 
CCATCCGTTG GGTTTGCCAG CCATCCTTTC TTCAATCTGA TGGTTGAGAT GGAGACAGAG 
CTCGCGCTGC CTGAATTGAT GAAGCAGTTA AAAGCGATCG AGCTGCGTTG TGGCCGTTTG 
CCGAATGCAC AAAAGTATCA GGATCGAACA CTGGATCTTG ATATTGTGCT GTATGGCGAT 
TGTGTATCGG AGAATGATCC AGTGCTGCCT CGACCGGATA TCTATCGCTA TCCGTTTGTG 
ATTCAACCTT TATATGAGCT CTGTCCGCAG CGAGTGATTG CTGGTGATGG TCGAACTGTT 
GAGCAGATTT GGCAACAAGC GCAGGATTTA GCATCACTCA CCCCAGTACC GATCTGGTTT 
TCTATTAACG AGAAGAAACA ATCATGA 

 

Protein sequence

MITAYIGVGS NQDRHQSIEA GLRALAELAS QWRLSTIYEC PSVGFASHPF FNLMVEMETE 
LALPELMKQL KAIELRCGRL PNAQKYQDRT LDLDIVLYGD CVSENDPVLP RPDIYRYPFV 
IQPLYELCPQ RVIAGDGRTV EQIWQQAQDL ASLTPVPIWF SINEKKQS