Gene VC0395_A0051 details

Gene Information

• Locus tag: VC0395_A0051
• ID: 5135692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 47982
• End bp: 48608
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640531511
• Product: putative glycerol-3-phosphate acyltransferase PlsY
• Protein accession: YP_001216024
• Protein GI: 147674048
• COG category: [S] Function unknown
• COG ID: [COG0344] Predicted membrane protein
• TIGRFAM ID: [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.00859928
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCCAT TGGCGCTCAG CATGATCATT TTTGCCTATC TACTGGGGTC AATTTCCAGT 
GCGGTGTTGA TTTGTCGTGT TCTGCGTCTC CCCGATCCGC GTAACGTGGG CTCACAAAAC 
CCCGGAGCCA CCAATGTACT GCGCATCGGC GGCAAAAAAG CCGCAGTGGC CGTTTTATTG 
TGTGACATGC TCAAAGGCAC CATCCCAGTT TGGGGCGGCT ACTTCCTCAA TATTGAACCT 
TTTATGTTGG GATTGGTGGC AATCGCCGCC TGCCTTGGTC ACATGTACCC GATTTTTTTC 
CATTTCAAAG GTGGAAAAGG CGTGGCAACC GCGTTAGGTG CAATCGCACC GATTGGGCTC 
GATTTAACCG CTATGGTGAT GGCCACATGG CTTGTCGTTG TCGTACTGTT TCGCTACTCG 
TCGCTTGCAG CCTTAGTCAC TGTGTTGCTC GCGCCCCTCT ACACTTGGCT GATTAAGCCA 
CAGTACACGC TTCCAGTTGC CATGTTGTGC TGTTTGATTG TGCTGCGCCA TCATCAAAAC 
GTGAAGCGCC TGTTTGCGGG TACCGAGCCC AAGGTCGGTG AAAAGAATAA GAAGCCGAGC 
GATGATGAAG AGAGCCGCGT CGTGTAA 

 

Protein sequence

MTPLALSMII FAYLLGSISS AVLICRVLRL PDPRNVGSQN PGATNVLRIG GKKAAVAVLL 
CDMLKGTIPV WGGYFLNIEP FMLGLVAIAA CLGHMYPIFF HFKGGKGVAT ALGAIAPIGL 
DLTAMVMATW LVVVVLFRYS SLAALVTVLL APLYTWLIKP QYTLPVAMLC CLIVLRHHQN 
VKRLFAGTEP KVGEKNKKPS DDEESRVV