| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0049 |
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| Symbol | gcp |
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| ID | 5136340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 45948 |
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| End bp | 46967 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531509 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001216022 |
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| Protein GI | 147675246 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000462165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTA TTGGTATTGA AACCTCTTGT GACGAAACGG GTATCGCGAT TTACGATGAC
GAAAAAGGAC TGCTGTCTCA TAAGCTTTAC AGTCAGGTAA AACTGCATGC CGATTATGGT
GGTGTGGTGC CTGAGCTGGC TTCGCGTGAT CATGTAAAAA AAACCATCCC ACTCATCAAA
GCGGCGATGG CAGAGGCAAA CGTGACGCCG CAAGATTTAG ACGGTGTGGC TTTTACCGCA
GGCCCCGGTT TGGTTGGGGC GCTCTTGGTT GGCGCTACGA TTGGGCGCAG TTTAGCGTAC
GCTTGGGATG TGCCAGCGGT GCCGGTTCAT CACATGGAAG GGCATCTTCT TGCTCCGATG
CTGGAAGAGA ATCCGCCGCC GTTTCCGTTT GTCGCTTTGC TGGTATCGGG TGGTCACACC
ATGCTGGTGG AAGTGAAAAA CATTGGTGAA TACCGCATTT TAGGTGAGTC TATCGATGAT
GCGGCTGGCG AAGCCTTTGA TAAAACGGCC AAATTGATGG GATTGGATTA TCCAGGTGGC
CCGTTATTGG CCAAGCTGGC GGAAAAAGGG ACTCCGGGAC GCTTTAAATT TCCCCGTCCT
ATGACGGACA GACCGGGGCT CGATATGAGC TTTTCCGGTT TAAAAACTTT TACTGCCAAT
ACCATTGCTG CAAATGGCGA CGATGAACAG ACCCGTGCGG ATATTGCTTA CGCCTTCCAA
GAGGCCGTGT GTGACACTTT AGTCATTAAA TGTAAACGCG CATTGGAGGA GACAGGACTT
AAGCGTGTGG TGATTGCGGG TGGTGTGAGT GCCAACAAGC AGTTGCGTGC TGATTTGGAA
AAACTCGCGA AAAAAATCGG TGGCGAAGTG TATTACCCAC GTACTGAATT TTGTACCGAT
AACGGAGCGA TGATCGCTTA TGCGGGCATG CAACGTTTGA AAAATGGTGA TGTGTGTGAA
CTTGGCTTGC AAGCTCGCCC GCGTTGGCCG ATTGATCAGT TAACGTCAAT TCAGAAATAA
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| Protein sequence | MRIIGIETSC DETGIAIYDD EKGLLSHKLY SQVKLHADYG GVVPELASRD HVKKTIPLIK
AAMAEANVTP QDLDGVAFTA GPGLVGALLV GATIGRSLAY AWDVPAVPVH HMEGHLLAPM
LEENPPPFPF VALLVSGGHT MLVEVKNIGE YRILGESIDD AAGEAFDKTA KLMGLDYPGG
PLLAKLAEKG TPGRFKFPRP MTDRPGLDMS FSGLKTFTAN TIAANGDDEQ TRADIAYAFQ
EAVCDTLVIK CKRALEETGL KRVVIAGGVS ANKQLRADLE KLAKKIGGEV YYPRTEFCTD
NGAMIAYAGM QRLKNGDVCE LGLQARPRWP IDQLTSIQK
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