| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0047 |
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| Symbol | rpsU |
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| ID | 5136554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 45492 |
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| End bp | 45707 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531507 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_001216020 |
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| Protein GI | 147674201 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000000427193 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGTAG TTAAAGTACG TGAAAACGAA CCGTTCGACG TAGCTCTGCG TCGTTTCAAA
CGCTCTTGCG AAAAAGCAGG TATCCTTTCT GAAGTGCGCC GTCGTGAGCA CTACGAAAAG
CCAACTACCG TTCGCAAACG CGCTAAAGCA GCTGCTCAAA AGCGTCACGC TAAGAAGCTA
GCTCGCGAAA ACGCACGTCG CGTTCGTCTG TACTAA
|
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| Protein sequence | MPVVKVRENE PFDVALRRFK RSCEKAGILS EVRRREHYEK PTTVRKRAKA AAQKRHAKKL
ARENARRVRL Y
|
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