Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0047 |
Symbol | rpsU |
ID | 5136554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 45492 |
End bp | 45707 |
Gene Length | 216 bp |
Protein Length | 71 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531507 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_001216020 |
Protein GI | 147674201 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000427193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTAG TTAAAGTACG TGAAAACGAA CCGTTCGACG TAGCTCTGCG TCGTTTCAAA CGCTCTTGCG AAAAAGCAGG TATCCTTTCT GAAGTGCGCC GTCGTGAGCA CTACGAAAAG CCAACTACCG TTCGCAAACG CGCTAAAGCA GCTGCTCAAA AGCGTCACGC TAAGAAGCTA GCTCGCGAAA ACGCACGTCG CGTTCGTCTG TACTAA
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Protein sequence | MPVVKVRENE PFDVALRRFK RSCEKAGILS EVRRREHYEK PTTVRKRAKA AAQKRHAKKL ARENARRVRL Y
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