Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0046 |
Symbol | |
ID | 5137494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 45019 |
End bp | 45462 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640531506 |
Product | hypothetical protein |
Protein accession | YP_001216019 |
Protein GI | 147675525 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000137941 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTGA TTGAGAATCT CAAAGAAGAG CAAAAACTAG CGATGAAAGC CAAGGATAAA CCACGCCTTG GCGCTATCCG TTTAGTGTTG GCCGCTATTA AACAACGTGA AGTCGATGAG CAGATCACTC TGAGCGATGA CGACATTGTT GCAGTGCTGA CCAAGATGGT GAAACAGCGT CGCGACTCTG TAAGCCAATA CGAAGCAGCA GGTCGTCAAG ACTTGGCTGA TGCGGAAAAA GCAGAGATCA CCGTACTTGA GGAGTTTATG CCTCAACCTC TGAGCGATGA TGAAGTGAAA GCCCTGATTG ACAGCGCAAT CACTGAATCA GCCGCCGCAG GCATGCAAGA CATGGGTAAG GTGATGGCTG TACTTAAACC GCATATTCAA GGGCGTGCAG ACATGGGTAA AGTGAGCGGT TTGGTCCGCG CTAAACTGGC TTAA
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Protein sequence | MALIENLKEE QKLAMKAKDK PRLGAIRLVL AAIKQREVDE QITLSDDDIV AVLTKMVKQR RDSVSQYEAA GRQDLADAEK AEITVLEEFM PQPLSDDEVK ALIDSAITES AAAGMQDMGK VMAVLKPHIQ GRADMGKVSG LVRAKLA
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