Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0035 |
Symbol | |
ID | 5136865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 31599 |
End bp | 32315 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531495 |
Product | hypothetical protein |
Protein accession | YP_001216009 |
Protein GI | 147674164 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTAA GGATCGAAAC GATGAAATTA TTTGCACCGG TGGTTTTACT GCTCTCTGTT CTTTCAAGCC CTACCTTTGC ACAGGAATGG GATTTTCCAC ATATTTCGAC TTCAGGTTAT GGTGAAGTGA CTGCTGTACC TGATATGGCG GAGTTTTCCG TGAAGGTTGT TGAATCGACA ATGAATGCGG AACAAGCGAA AGCGGCAGTG GATAAGGCGG TAACGGAATT CACCTCAAAA TTGGTGAAAT CCGGTGTCGC ACAGCAGAAT ATCTCGAGCT CAAATCTGTA CATCAACCCG CAATATCACT ATCCAGCAAA CGGTAAGCCA GAGTTAGTGG GCTATCAAGC TTCTCGCTCG ATTACCGTCA GGGTCGAAGA GGTGAGTAAG CTGAATCAGT ATCTGGATAT CGCGTTAGAG TCTGGTATCA ATCAAGTCAA TAGCATTCAA TTGAAGGTGC GTGATCAAGA GAAATACCAG CAGCAAGCGC GTATGGCGGC GATTGAAGAT GCCAAGCTCA AAGCTCAGTC TCTAGCTAAG GGATTTGAGC GCCGCTTAGA AGGCGTTTGG CGGATAGACT ACAACACGCC AAGTGTTGAG CCGATCATGA TGCGAGCGGC GAATCTAAGC GAAAAAATGG ATGTGGCAGA TACCTATCAA GAGTCTTCCT TGGTGATTCG TGATCGAGTG GATGTGGTAT ATAAGTTGGC ACCATAG
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Protein sequence | MTLRIETMKL FAPVVLLLSV LSSPTFAQEW DFPHISTSGY GEVTAVPDMA EFSVKVVEST MNAEQAKAAV DKAVTEFTSK LVKSGVAQQN ISSSNLYINP QYHYPANGKP ELVGYQASRS ITVRVEEVSK LNQYLDIALE SGINQVNSIQ LKVRDQEKYQ QQARMAAIED AKLKAQSLAK GFERRLEGVW RIDYNTPSVE PIMMRAANLS EKMDVADTYQ ESSLVIRDRV DVVYKLAP
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