Gene VC0395_A0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0035 
Symbol 
ID5136865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp31599 
End bp32315 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID640531495 
Producthypothetical protein 
Protein accessionYP_001216009 
Protein GI147674164 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA GGATCGAAAC GATGAAATTA TTTGCACCGG TGGTTTTACT GCTCTCTGTT 
CTTTCAAGCC CTACCTTTGC ACAGGAATGG GATTTTCCAC ATATTTCGAC TTCAGGTTAT
GGTGAAGTGA CTGCTGTACC TGATATGGCG GAGTTTTCCG TGAAGGTTGT TGAATCGACA
ATGAATGCGG AACAAGCGAA AGCGGCAGTG GATAAGGCGG TAACGGAATT CACCTCAAAA
TTGGTGAAAT CCGGTGTCGC ACAGCAGAAT ATCTCGAGCT CAAATCTGTA CATCAACCCG
CAATATCACT ATCCAGCAAA CGGTAAGCCA GAGTTAGTGG GCTATCAAGC TTCTCGCTCG
ATTACCGTCA GGGTCGAAGA GGTGAGTAAG CTGAATCAGT ATCTGGATAT CGCGTTAGAG
TCTGGTATCA ATCAAGTCAA TAGCATTCAA TTGAAGGTGC GTGATCAAGA GAAATACCAG
CAGCAAGCGC GTATGGCGGC GATTGAAGAT GCCAAGCTCA AAGCTCAGTC TCTAGCTAAG
GGATTTGAGC GCCGCTTAGA AGGCGTTTGG CGGATAGACT ACAACACGCC AAGTGTTGAG
CCGATCATGA TGCGAGCGGC GAATCTAAGC GAAAAAATGG ATGTGGCAGA TACCTATCAA
GAGTCTTCCT TGGTGATTCG TGATCGAGTG GATGTGGTAT ATAAGTTGGC ACCATAG
 
Protein sequence
MTLRIETMKL FAPVVLLLSV LSSPTFAQEW DFPHISTSGY GEVTAVPDMA EFSVKVVEST 
MNAEQAKAAV DKAVTEFTSK LVKSGVAQQN ISSSNLYINP QYHYPANGKP ELVGYQASRS
ITVRVEEVSK LNQYLDIALE SGINQVNSIQ LKVRDQEKYQ QQARMAAIED AKLKAQSLAK
GFERRLEGVW RIDYNTPSVE PIMMRAANLS EKMDVADTYQ ESSLVIRDRV DVVYKLAP