Gene VC0395_A0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0033 
Symbol 
ID5135236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp29823 
End bp30458 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content45% 
IMG OID640531493 
ProductLysE family protein 
Protein accessionYP_001216007 
Protein GI147675146 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGT GGATTCTGCT ACAAGGATTC AGCTTGGGAG CGACCATGAT TATTCCCATT 
GGTGCTCAAA ATGCTTATGT ATTAAATCAA GGGATTAAAC GTCATCACCA CTTAACCACC 
GCAGCCACTT GTGGGGTGCT GGATATGATT TTTATCACGC TGGGGATTTT TGGCGGTGGT 
GCTCTCATCT CGCAAAATAC CAGCTTGTTA ATTGGTGTCA CTTTGGCTGG AATTCTTTTT 
CTGTGTGGTT ATGGGTTTCT TTCTTTGCGT GCTGCGCTCA AACCGCCCCA AGCATCTGAA 
TCCACGGCAA ATCCGATGGC TGCAGGACGT AAAGCGGTCA TTTTTGGTGC CTTTGCGGTC 
ACTGTGTTTA ACCCGCATCT CTATTTGGAT ACCGTGGTGA TCTTAGGGTC AATCGGAGGC 
CAATTCCAAG GTGATGAGCG TATCTCATTT GCGATTGGTA CCATTCTCGC CTCATTCGTG 
TGGTTTTTTA CTCTTTCACT CGGAGCAGCA AAATTGAGCA CCACACTCTC TAAACCTAGA 
GTCAGACAAG TGATTGATAT GGCAGTCGCC GCGATGATGT TCATTATTGC CTTCGCGTTG 
ACTAAGAACT TATATCTCAA TCACTGGTTA AATTAA
 
Protein sequence
MNWWILLQGF SLGATMIIPI GAQNAYVLNQ GIKRHHHLTT AATCGVLDMI FITLGIFGGG 
ALISQNTSLL IGVTLAGILF LCGYGFLSLR AALKPPQASE STANPMAAGR KAVIFGAFAV 
TVFNPHLYLD TVVILGSIGG QFQGDERISF AIGTILASFV WFFTLSLGAA KLSTTLSKPR 
VRQVIDMAVA AMMFIIAFAL TKNLYLNHWL N