Gene VC0395_A0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0023 
Symbol 
ID5137467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp17690 
End bp18178 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID640531483 
Producthypothetical protein 
Protein accessionYP_001215997 
Protein GI147673320 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTT TTGATCTGCA CTGCCAAGCT GAGCAGAAAA TCAAACAGTG TATCGCCACC 
GCCAGCGAGA CTTTACAACG CCCTTTTAAA CTACCTAAGC TCAACTACCG TTTACGTGGG
CGCGCCGCCG GTAAAGCCTA TTTACAGCTG TGGGAAATCC GTCTTAATCC GGTGCTGTTT
ACCGAAAACG TCGATGACTT CCTCCAGCAA GTGATCCCAC ACGAAATCGC GCATCTGATT
ACGTATCAGC TTTATGGCCG AGTACGTCCA CACGGAGCCC AATGGCAACA AATGATGAGC
CAAGTCTTTA ATCTTGAGCC AAAAACCACT CACACCTTTT CTGTCACTTC AGTACAGGGC
AAAACCTTCC ACTACCGCTG TGCGTGCCGC GAATATCCGC TCACCATTCG TCGCCACAAT
AAAGTGCTGC GTGGTGAAGC TACCTATCGC TGTCAAAACT GCCAACAAAA CTTGATCTAC
CAAGCCTAA
 
Protein sequence
MVRFDLHCQA EQKIKQCIAT ASETLQRPFK LPKLNYRLRG RAAGKAYLQL WEIRLNPVLF 
TENVDDFLQQ VIPHEIAHLI TYQLYGRVRP HGAQWQQMMS QVFNLEPKTT HTFSVTSVQG
KTFHYRCACR EYPLTIRRHN KVLRGEATYR CQNCQQNLIY QA