Gene VC0395_A0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0019 
Symbol 
ID5135736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand- 
Start bp14426 
End bp15028 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content51% 
IMG OID640531479 
Producthypothetical protein 
Protein accessionYP_001215993 
Protein GI147674877 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAACC ATAGCAGTGA CATAGAGGTT GGACACAGTA TGAATCTTAC CAATCATTTT 
CTGGTTGCCA TGCCAAGCAT GAAGGATCCT TACTTCAAGC GCAGCGTGAT TTATATTTGC 
GAGCACAACC AAGATGGTGC GATGGGGTTA ATGATCAATG CGCCGATCGA TATTACGGTC 
GGCGGCATGC TCAAGCAGGT CGATATTGAG CCCGCTTACC CACAATCGCA CCAAGAGAGT 
CTGAAAAAGC CGGTGTTTAA TGGTGGTCCG GTGTCGGAAG ATCGTGGGTT TATTCTGCAT 
CGTCCGCGCG ATCACTATGA ATCGAGCATG AAGATGACCG ATGATATCGC CGTCACCACC 
TCGAAGGATA TTCTCACTGT ACTGGGTACC GAGGCGGAGC CTGAAGGCTA CATTGTCGCG 
CTGGGCTATT CGGGTTGGTC TGCTGGCCAG TTAGAGGTGG AACTCACCGA AAACTCGTGG 
CTCACCATAG AAGCGGATCC TGAGCTGATT TTTAACACGC CCGTGCATGA GAAATGGCAA 
AAGGCTATTC AAAAACTCGG CATCTCCCCT GCGCAGCTTT CCAGCGACGC CGGACACGCC 
TAA
 
Protein sequence
MSNHSSDIEV GHSMNLTNHF LVAMPSMKDP YFKRSVIYIC EHNQDGAMGL MINAPIDITV 
GGMLKQVDIE PAYPQSHQES LKKPVFNGGP VSEDRGFILH RPRDHYESSM KMTDDIAVTT 
SKDILTVLGT EAEPEGYIVA LGYSGWSAGQ LEVELTENSW LTIEADPELI FNTPVHEKWQ 
KAIQKLGISP AQLSSDAGHA