| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0016 |
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| Symbol | |
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| ID | 5137549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 11693 |
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| End bp | 12496 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531476 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001215990 |
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| Protein GI | 147675703 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATGC CGATCACGAC TCAAGAGTAT CTCGCATTAG GTGACGCGAT TGCGGCGTTA
AAGACGCCGC AATTTACGTC GCATCTTGTG GCAGTGCTAC GCTGTATTGC CGATTTTGAT
TGCGCGGTGA TCTTGGGCTA TCGTCCCAAC AAACATCCGA TTTATCTGTA TGACTCGCTC
TCGATCCAGC GTGAGCTGCT GTTTCAGCGT TATCTGACTC ATGCTTATCT TGATGATCCT
TTCTATAGCG CTTTGCAGCA CAACACGCGC TCAGGGGTGT TTCATCTTTC CGATTTAATG
CCGCTCAATC CACAGCAAAA AGCCTATCAA CACCAGTTTT ATGCGCAAAC CGGTTGGCAA
GATGAAGTGA GTTTGGTGGT CAATCTTGAT GGCGAGCGTT CGATTGTGGT GTATCTCGGC
TGCTTTAAGC CGCGCTCTTT TCCACGCGAA CAGATTGCCG CGTTGCAACA GCGGTTTACC
GTGTTGCAAG CCTTGTGTCA GCAGCATTGG CAGCAGCAGC CACTGCGGTT AGCGGAAAGT
GCGCAGCCAA GCCAAGAGTT ACGGACTTGG GTTGAACAGG CGATCCAGAG TTTTGGCGCG
CAGCGTTTAA GCCCGCGAGA GCAGGAGATC ACCGCACTGC TCATCCAAGG TTTAGACTCA
CAAGAAATTG CCGATGCGCT GGCCATCAGC CACGGCACAG TCAAAAATCA TCGTAAACGC
ATCTATGCGC AGCTGCATGT CAGCTCGTTA AGCGAGCTGT TTCAACTGTT TCTCAATCAT
CTGATTGGCG CAGCCGCGGA TTAG
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| Protein sequence | MRMPITTQEY LALGDAIAAL KTPQFTSHLV AVLRCIADFD CAVILGYRPN KHPIYLYDSL
SIQRELLFQR YLTHAYLDDP FYSALQHNTR SGVFHLSDLM PLNPQQKAYQ HQFYAQTGWQ
DEVSLVVNLD GERSIVVYLG CFKPRSFPRE QIAALQQRFT VLQALCQQHW QQQPLRLAES
AQPSQELRTW VEQAIQSFGA QRLSPREQEI TALLIQGLDS QEIADALAIS HGTVKNHRKR
IYAQLHVSSL SELFQLFLNH LIGAAAD
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