Gene VC0395_A0008 details

Gene Information

• Locus tag: VC0395_A0008
• ID: 5135442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 5766
• End bp: 6368
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640531468
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: YP_001215982
• Protein GI: 147673291
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TCGTTTTAGC CACGGGCAAT CAAGGCAAAG TGCGTGAAAT GGCTGACCTA 
TTGTCCGATT TTGGGTTTGA TGTCGTCGCG CAAAGCGAAT TCAACGTCCC TGAAGCGGCA 
GAAACAGGCA CCACTTTTAT TGAAAATGCG ATCATCAAAG CACGTCATGC CGCGCAAATT 
ACCGGCTTAC CGGCGATTGC CGATGATTCC GGTTTGGAAG TGGATTACCT AAACGGCGCG 
CCGGGCATCT ATTCTGCGCG CTACGCGGGC GAGCATGCCA GCGACGGCGA CAATCTCAAT 
AAGCTGCTAG CGGCGATGCA AGATGTGCCA GACAACCAGC GCAGCGCGCG TTTTCATTGT 
GTGCTGGTGT TGATGCGCCA CTCCGATGAT CCAACGCCTA TCGTTTGCCA CGGCAAGTGG 
GAAGGCAAAA TCCTCACCGC ACCACACGGC AGCAATGGCT TTGGTTACGA TCCGATTTTC 
TGGGTTCCGG AAGAAAACTG CGCTTCTGCT GAGCTAGAAC CGGTGCGCAA AAAGCAGCTA 
TCCCATCGCG GCAAAGCCCT GCAAAAACTG TTCAAAGCGA TCGAAGAGCA GCGTACATGC 
TAA 

 

Protein sequence

MKKIVLATGN QGKVREMADL LSDFGFDVVA QSEFNVPEAA ETGTTFIENA IIKARHAAQI 
TGLPAIADDS GLEVDYLNGA PGIYSARYAG EHASDGDNLN KLLAAMQDVP DNQRSARFHC 
VLVLMRHSDD PTPIVCHGKW EGKILTAPHG SNGFGYDPIF WVPEENCASA ELEPVRKKQL 
SHRGKALQKL FKAIEEQRTC