| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0005 |
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| Symbol | trmB |
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| ID | 5136994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 2500 |
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| End bp | 3219 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531465 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_001215979 |
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| Protein GI | 147674960 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0101638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG TCATCACCCA GGAATATACC GAAGATGGCA AAGTGCTGCG TCGTATTCGT
AGCTTTGTTC GTCGTGAAGG TCGTTTGACC AAAGGCCAGG AAGCCGCAAT GAAAGAGTGC
TGGCCAACCA TGGGGATTGA TTACCAGCCA GAGCTGTTGG ATTGGCAACA GGTGTTTGGT
AACGACAATC CGGTTGTGCT GGAGATTGGT TTTGGTATGG GCGCGTCCTT GGTCGAAATG
GCGAAAAACG CACCTGAGAA AAACTTCCTC GGCATTGAAG TACACAGCCC AGGTGTCGGT
GCTTGTTTGG CTTCGGCGCG TGAAGCGGGT GTCACTAACT TGCGTGTGAT GTGCCATGAC
GCGGTGGAAG TGTTTGCACA CATGATCCCA GATAACAGCC TGCACACTTT GCAATTGTTC
TTCCCAGATC CTTGGCACAA GAAGCGTCAC CACAAGCGCC GTATCGTGCA GCTTGAATTT
GCTGAAATGG TACGCCAAAA GCTCATCATC GGCAGCGGTG TATTCCATAT GGCAACTGAC
TGGGAAAACT ACGCAGAACA CATGGTTGAA GTGATGAATC AAGCACCCGG TTTTGCTAAC
TTGGCAACCG ATGGCGATTA CATCCCGCGC CCTGATGAGC GCCCGCTGAC TAAGTTTGAG
CAGCGTGGTC ACCGTTTAGG TCACGGAGTG TGGGATATTA AGTACCAACG CACTGCTTAA
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| Protein sequence | MSEVITQEYT EDGKVLRRIR SFVRREGRLT KGQEAAMKEC WPTMGIDYQP ELLDWQQVFG
NDNPVVLEIG FGMGASLVEM AKNAPEKNFL GIEVHSPGVG ACLASAREAG VTNLRVMCHD
AVEVFAHMIP DNSLHTLQLF FPDPWHKKRH HKRRIVQLEF AEMVRQKLII GSGVFHMATD
WENYAEHMVE VMNQAPGFAN LATDGDYIPR PDERPLTKFE QRGHRLGHGV WDIKYQRTA
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