| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1130 |
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| Symbol | |
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| ID | 5134121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1097234 |
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| End bp | 1098445 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531452 |
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| Product | hydroxyglutarate oxidase |
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| Protein accession | YP_001215966 |
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| Protein GI | 147672382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTATG ATTACGTGAT TGTTGGTGGT GGGATTGTCG GTGTCTCCAC GGCTTGGCAA
CTGAAACTGC GTTATCCGGA AAAATCGATT CTGCTGGTGG AAAAAGAGGC GGGATTCTCC
CGCCATCAAA CTGGTCACAA CAGCGGGGTG ATCCATGCGG GGGTTTATTA TGCTCCTGGT
AGTTTGAAGG CTGATTTTTG TAAACGCGGA GTCGAACGCA CTTTGGCGTT TTGCGCGCAA
CACAATATTC CAGTGGAAAA CTGCGGCAAG TTACTGGTGG CCACCAATGA GCAAGAACTC
GAACGCATGC ACGCACTCTA TGATCGCTGC TTACAAAATC AGATCGACGT TGAAAAACTG
GATGCCGTGC AGTTGAAGCT GGCGGAGCCC AATATTCGTG GCTTGGGGGC GATCTTGGTG
AAAGCGACCA GTATCGTCAA TTATCGTCTG GTGACCGAGA AAATGGCCGA AGCCTTTATG
CAGTTGGGGG GTGATGTGAA AATAGGCACG GAAGTGGTGG GCTTGGAAGA AACGCCATCC
TCGATCACGC TAACTTGCCA ACAGAAGAAC CAACGCGTGA GTTATCAGGC CAAATTTCTG
GTCACCTGTT CAGGCTTAAT GGCCGATCGC TTAACCAAGA TGCTCGGTTT GCCGACCGAT
TTTCAGATCA TCCCCTATCG TGGCGAATAC TATCGTTTGG CACCCAAGCA TAACCAAGTG
GTGCGTCATC TTATCTACCC GATTCCGGAT CCTGAATTGC CGTTTCTCGG CGTACATTTA
ACTCGCATGA TTGATGGCAG CGTGACCGTT GGTCCCAATG CCGTACAAGG TTTTAAGCGT
GAAGGTTATT GCAAATGGAA TGTTAGCCTC CGCGATGTGT GGGAGATGGT TTGCTTCCCC
GGCTTTTGGA AAGTGAGTGC CAAGCACTTT AAAACGGGTA TGGTCGAAAT GAAAAACTCA
TGGTGGAAAG CGGGCTACTT ACAGTTGGTA CGTAAATACT GCCCAAATAT CGAACTCGCG
GATCTTCAGC CTTACCCTGC AGGCATTCGT GCCCAAGCGG TATTAAGTGA TGGTACGCTG
GTGCACGATT TTCTGTTTGC CGAAAGTCCG CGCAGTTTGC ATGTGTGTAA CGCGCCTTCT
CCAGCGGCCA CTTCCGCAAT GCCAATCGGC GAATATCTGT GCGATAAAAT CGCGGAAAAA
TCGCTCGCTT GA
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| Protein sequence | MTYDYVIVGG GIVGVSTAWQ LKLRYPEKSI LLVEKEAGFS RHQTGHNSGV IHAGVYYAPG
SLKADFCKRG VERTLAFCAQ HNIPVENCGK LLVATNEQEL ERMHALYDRC LQNQIDVEKL
DAVQLKLAEP NIRGLGAILV KATSIVNYRL VTEKMAEAFM QLGGDVKIGT EVVGLEETPS
SITLTCQQKN QRVSYQAKFL VTCSGLMADR LTKMLGLPTD FQIIPYRGEY YRLAPKHNQV
VRHLIYPIPD PELPFLGVHL TRMIDGSVTV GPNAVQGFKR EGYCKWNVSL RDVWEMVCFP
GFWKVSAKHF KTGMVEMKNS WWKAGYLQLV RKYCPNIELA DLQPYPAGIR AQAVLSDGTL
VHDFLFAESP RSLHVCNAPS PAATSAMPIG EYLCDKIAEK SLA
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