| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1128 |
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| Symbol | def-2 |
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| ID | 5134559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1092465 |
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| End bp | 1092971 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531450 |
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| Product | peptide deformylase |
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| Protein accession | YP_001215964 |
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| Protein GI | 147672038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000000081593 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGTTC TAGAGATTCT TACTGCACCC GATCCAAGAC TTCGTGTTCA ATCCAAACAG
GTCACGGATG TGGCCTCAGT ACAAACCTTA ATTGACGACC TGCTTGATAC CCTGTACGCC
ACGGACAACG GTATTGGTCT GGCAGCACCG CAAGTAGGCC GCGAAGAAGC GATTGTGGTG
ATTGATTTGT CAGACAATCG TGACCAGCCA CTGGTGCTGA TCAACCCAAA AGTGGTCAGT
GGCAGCAATA AAGAGATGGG TCAAGAAGGT TGTCTATCGG TGCCAGACTA CTACGCGGAT
GTGGAGCGTT ATACTTCTGT CGTGGTGGAA GCGCTGGATC GTGAGGGTAA GCCACTGCGC
ATCGAAACGA GCGATTTCCT TGCCATTGTC ATGCAACACG AAATTGACCA CCTTTCTGGC
AATCTGTTTA TCGACTATCT ATCACCACTA AAACAGCAAA TGGCGATGAA AAAAGTCAAA
AAACATGTGA AGAATCGCGC ACGTTAA
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| Protein sequence | MAVLEILTAP DPRLRVQSKQ VTDVASVQTL IDDLLDTLYA TDNGIGLAAP QVGREEAIVV
IDLSDNRDQP LVLINPKVVS GSNKEMGQEG CLSVPDYYAD VERYTSVVVE ALDREGKPLR
IETSDFLAIV MQHEIDHLSG NLFIDYLSPL KQQMAMKKVK KHVKNRAR
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