| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1122 |
|---|
| Symbol | |
|---|
| ID | 5133947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009456 |
|---|
| Strand | + |
|---|
| Start bp | 1087996 |
|---|
| End bp | 1088349 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640531444 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit C |
|---|
| Protein accession | YP_001215958 |
|---|
| Protein GI | 147672480 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.042488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGAT TATGGAGCAT TGTTGTCGGT GTTTTTGTCG CCGCCGGTAT CTACTTAATG
CTAGAGCGAC ACTTACTGCG CTTATTGTTT GGCCTGATCC TCCTCAGTAG TGCGGTGAAC
TTGGCCATTT TTACCGCAGG ACGCTTAACC CCCGCCTCAC CACCATTAAT TGAGGTAGGA
GCCTTGTTAC CAGCGGAAGG TGCGGCGAAC CCGCTGCCAC AAGCCCTGAT TTTAACCGCC
ATTGTGATCG GTTTTGGCTT ACTGGTTTTT GCTTTGATGT TGTTTTACCG AGCTTATTTT
GAGACTCGCA GCGCGGACGT CGATGAGATG CGTCGCTCAG AGGAGGAAGA ATGA
|
|---|
| Protein sequence | MEGLWSIVVG VFVAAGIYLM LERHLLRLLF GLILLSSAVN LAIFTAGRLT PASPPLIEVG
ALLPAEGAAN PLPQALILTA IVIGFGLLVF ALMLFYRAYF ETRSADVDEM RRSEEEE
|
|---|
| |