| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1121 |
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| Symbol | |
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| ID | 5134318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1085321 |
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| End bp | 1087996 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531443 |
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| Product | putative NADH dehydrogenase |
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| Protein accession | YP_001215957 |
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| Protein GI | 147672136 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.49523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGACAG GACTCGATAA GCATACATCC CTCACCCCAA ATACAGTGTC GGCGAGATTA
CTTCCTTTCG CCGTTTTACC CATCCTTCTA TTTGGGTGGG TGTTTTATTG GCATCAAACC
GGTGGTAACG CTTGGCAAGT CACTTGGGTT CCTGGGCTGG ATCTGAATCT CAGTTTCCGA
CTTGACGGGC TCTCTTTTCT TTTTGCCTCG TTGATCACAG GCATCGGTGC CTTGATTCAA
ATCTATGCCC TCGCTTACAT GAAAGAGAAA GCGGCGCGCT TCTCATTTCA TCTCTACCTC
ACTCTCTTCA TGCTCGCCAT GCTTGGCGTG GTGGTAAGCG ACAATATTTT ACTGCTGTTC
ATCTTCTGGG AACTGACCAC CATCACTTCC TATCTGCTGA TTGGTTTTAA TCATGACAAA
CCAGTCTCAC GCAAAAATGC CCTACAGTCA CTTTTAGTCA CGGGGGCCGG AGGACTCGCG
CTGTTAGCCG GACTGATTTT ACTTGGCTTG ATGGCCAATA GTTATCAAAT CAGCGTCATC
ATTGAACACG CGGATCACAT CGCGCAACAT CCGTGGTTTA TGCCTTCGCT GATTTTAGTT
TTACTCGGTG CATTCACTAA ATCTGCGCAA TTTCCATTCC ATTTCTGGTT ACCCAATGCC
ATGGCCGCAC CGACACCGGT GAGCGCTTAC TTGCATTCAG CGACCATGGT TAAGGCTGGA
ATCTATCTTT TGGCCCGCTT ATCACCGATT TATGCCAGTA GTGATTTTTG GTTCTACTGC
TTAACCATTG TGGGCGCGGT AACGGCACTT TGGTGCGCGC TACTGGCGTT CAAGCAAACC
GATCTAAAAC TGATGTTGGC CTACAGCACC AATGTTGCGT TAGGCAAATT GACCCTGCTG
CTGGGATTAG GTACCGAGGT CGCGCTGACC GCTGCTGTGT TGTTTATTTT CGCCCACTCA
TTTTACAAAG CCGCACTCTT TATGGTGGTC GGCAATATTG ATAAAGCGAC GGGCACTCGA
GAGCGAGAAA AGCTCGGCAA CTTAAAATCC GTCTTGCTGC TGAGCCTTAT TGCTGCGGTT
ATTGCCGCTT TATCCAAATC CGGTGTTGCG CCTATGCTCG GATTTTTGAG CAAGGAGTAC
ATGTACAAAT CCAGTGTGGA ATCTGGCATT GCGTGGATTT CGCTGGTCTT ATTACTGATT
AATGCGCTGA TGGTGGCGTT AGCCATCGCA CTACTTTACA AACCCTTTTT TGGCCAAGCG
ACCAAGGAGA GTGAAAGCCA CCCACCCAAA GCGATCGAAC AGAAAAAATC CCTTTGGCTA
CCTGCGATGG GATTGGCTAT CGCCAGTTTC CTACTGCCTG TTTTTGCCCT GGATTGGATT
AACCAGCATT TAGTCATACC AGCAGTCATG GCGATGGATC CAAACAGCGT TCCACAAGCC
GCAAAATTAT GGCAAGGCTT CAATATCCCG CTGGCTTTGA GTGGTATCAC GCTTGTGTTA
GGGGGCGTGC TGTATCTGAA CTACGCAACC CTAGTCACAT GGCTCACGCG CCTAGTGAAG
CCGCTGCCCA AAGCTGAGCA AATGTTTGAT GCCGTGCTGG CTTATTTAGC GACATTGGCA
AGCTGGCAAA CGCAAATGCT GCAACAAAAA CGCTCAAGCG GTTATATGCT GCTATTTTTT
GCCGTTTTAG CCTTAATACT GCTCTATCAG CCGCTACCTT TACCAGCCAC TTTCAGCGCC
TCGCTGTTTG ATGTTCATTT TTATGAAGTC GCAATTGCGC TCGCACTCAT CGCTTCTGCG
CTGTTGTGTG TGCTGAGCAC GTCTCGTTTG CTGTCGGTAT TAGCGCTCGG CATGGCTGGA
TTTATGACGA CGCTGGTCTT TATGATTTAC AGCGCTCCTG ATGTTGCCAA AACCCTTTTG
CTGGTCGAAA CACTGATGGT GGTGTTTGTG GTGCTTTTGA TGCGTCATAT GCCCTACTTG
TCGACGGTCG CTCGCCATTC TGTAGCGCGT CGCACATTGA ATGCGGTGAT AGCCAGTGTG
ATTGGCGCAT CCGTAACCTT AATCCTGCTC AATATCACAG CGCATCCTAT CGATACCACT
TTGTCTGACT ATTTTGCGCA GCAGAGCGTT CCCGGCGGTC ATGGCCGCAA CATCGTCAAT
GTCATTTTGG TCGATTTTCG TGCCTTTGAT ACCTTGGGAG AAGTCATTGT GGTCATCATG
GCGAGCCTTG TCGCGATTAG CCTCTTACCC AAACGAACCG AGCAACCACA GAAGATTCAT
TCTCTAATCT TTGCCACTAC CGCACATATT GTGACTGCCT TGATGCTGAT GTTTTCCCTC
TATCTACTGC TGAGAGGACA CAATGCTCCC GGCGGCGGCT TTATCGGCGC ATTGATCGCG
GTGATCGGCT TTTCGCTGCT CCTCTTCGCC GAATCGCCCC AATACGTGAG AGATCGTCTC
CACTTCTCGC CACTCAATAT TGCCCTGTTT GGCATTCTGC TCAGTTTTAT GGCAGGAGCC
ATGAGTGTCG CGGTCGGTTT ACCTTTCCTA ACTGGATTAT GGTGGAAAGA AATTTTACCG
CTTGGCACCC CACTGCTCTT TGATGTCGGC ATCTATCTGG CGATCATCGG CGGTGTCATG
AGCATGTTGC TGCGCGTTAA GGAGGAACTC GACTAA
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| Protein sequence | MKTGLDKHTS LTPNTVSARL LPFAVLPILL FGWVFYWHQT GGNAWQVTWV PGLDLNLSFR
LDGLSFLFAS LITGIGALIQ IYALAYMKEK AARFSFHLYL TLFMLAMLGV VVSDNILLLF
IFWELTTITS YLLIGFNHDK PVSRKNALQS LLVTGAGGLA LLAGLILLGL MANSYQISVI
IEHADHIAQH PWFMPSLILV LLGAFTKSAQ FPFHFWLPNA MAAPTPVSAY LHSATMVKAG
IYLLARLSPI YASSDFWFYC LTIVGAVTAL WCALLAFKQT DLKLMLAYST NVALGKLTLL
LGLGTEVALT AAVLFIFAHS FYKAALFMVV GNIDKATGTR EREKLGNLKS VLLLSLIAAV
IAALSKSGVA PMLGFLSKEY MYKSSVESGI AWISLVLLLI NALMVALAIA LLYKPFFGQA
TKESESHPPK AIEQKKSLWL PAMGLAIASF LLPVFALDWI NQHLVIPAVM AMDPNSVPQA
AKLWQGFNIP LALSGITLVL GGVLYLNYAT LVTWLTRLVK PLPKAEQMFD AVLAYLATLA
SWQTQMLQQK RSSGYMLLFF AVLALILLYQ PLPLPATFSA SLFDVHFYEV AIALALIASA
LLCVLSTSRL LSVLALGMAG FMTTLVFMIY SAPDVAKTLL LVETLMVVFV VLLMRHMPYL
STVARHSVAR RTLNAVIASV IGASVTLILL NITAHPIDTT LSDYFAQQSV PGGHGRNIVN
VILVDFRAFD TLGEVIVVIM ASLVAISLLP KRTEQPQKIH SLIFATTAHI VTALMLMFSL
YLLLRGHNAP GGGFIGALIA VIGFSLLLFA ESPQYVRDRL HFSPLNIALF GILLSFMAGA
MSVAVGLPFL TGLWWKEILP LGTPLLFDVG IYLAIIGGVM SMLLRVKEEL D
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