Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_1113 |
Symbol | |
ID | 5134511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | + |
Start bp | 1079487 |
End bp | 1079969 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531435 |
Product | hypothetical protein |
Protein accession | YP_001215949 |
Protein GI | 147672199 |
COG category | [S] Function unknown |
COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTTT TCTCTGCCGT ACTGCTGTTA TTGCTGATTT TCCCTAACCT GAGTTATGCG CAAGTCGATT TAGTGAAAGT GGATAAATCG AAACGGCGTA TGTACTTACT CCAAGGCAAT GAAATCATTC GTGAGTATCG TATTGCTCTA GGAAAATCGC CTAAAGGGCA TAAGCAGCAA GAAGGCGACC AACGCACACC AGAGGGACAC TATCTTTTAG ACTTTATTAT TGAAGATTCG AGCTTCTACC GTTCGATACA CATTAGCTAC CCCAACACTC GCGATCAGCA GCTCGCTCAT TTGCGCGGCG TAAATCCCGG TGGTGATATT AAGATTCATG GCTTAAAAAA CGGTGATGAG AGAGAGCCGA GTTTCGTACA AAGCTTTGAT TGGACGAACG GCTGCATTGC CATTACCAAT CAAGAAATGG ATGAGTTTTT AAGCCTAGTT CAGCCCGGTG TGCCCATACA TATTGAGTGG TAA
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Protein sequence | MRLFSAVLLL LLIFPNLSYA QVDLVKVDKS KRRMYLLQGN EIIREYRIAL GKSPKGHKQQ EGDQRTPEGH YLLDFIIEDS SFYRSIHISY PNTRDQQLAH LRGVNPGGDI KIHGLKNGDE REPSFVQSFD WTNGCIAITN QEMDEFLSLV QPGVPIHIEW
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