Gene VC0395_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_1096 
SymbolpepT 
ID5134913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp1061683 
End bp1062915 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content48% 
IMG OID640531418 
Productpeptidase T 
Protein accessionYP_001215932 
Protein GI147671614 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2195] Di- and tripeptidases 
TIGRFAM ID[TIGR01882] peptidase T 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC TTGTTGGGCG CTTTATGCGC TATGTCACTT TTGATACTCA ATCGAAACCG 
AAAAACCATC ACTGCCCAAG CTCTACGGGT CAGAAAGTCT TTGCCCAAGC GCTGTATGAA
GAGCTACTTG AATTAGGCTT AAGTGATGTT TCGCTGGATG ATCATGGCTA TGTGATGGCC
AAACTCCCAT CGAATGTGAA CTACCCAGTG CCCGCGATTG GCTTTATTGC CCACATGGAC
ACCTCTCCAG ATGCTTGCGG TAAGCATGTT AAACCGCAAA TTGTTGAAGA TTATCAAGGC
GGTGATATTG CCCTTGGTAA AGGGGATGAA GTGTTGTCGC CCATTCAATA CCCTGACTTG
CATCTGCTGC ATGGCTATAA CCTCATCACG ACCGATGGCA CAACCTTATT AGGTGCAGAT
AACAAAGCGG GGATTGCTGA AATCATCACC GCGATGGAAA TCTTGCTTGC TGATTCTTCG
ATTCCCCATG GCGATATCTC GATTGCATTC ACGCCAGATG AAGAGATTGG CCGCGGTGCC
AATCATTTTG ATGTGGCGAA ATTTGCGGCG CAGTGGGCAT ATACCATCGA TGGCGGCCCG
ATTGGAGAGC TGGAGTATGA GAACTTCAAC GCCGCCACAG CGACGGTTGT TTGTCATGGA
GTGAATCTGC ATCCGGGGAC AGCCAAAGAC AAAATGGTCA ACGCTATGCA CATTGCAGCG
CAGTTTATTC TGATGATGCC AGAAAACGAA ACGCCTCAGC ATACCGAAGG CTATCAAGGT
TTCTACCATC TTTCTGGCGC GACCATGAGT GTTGCCAAAT CAGAGCTCAA ATATATTTTG
CGTGACTTTG AGGCGAGCGG TTTACAAGCT CGCCAAGCGT TAATGCAAGC CAAAGTAGCC
GAGCTCAATC AGCAGCTTAA AAAAGGTCGT GTCGAGGTGA GTTTCGAGCA GAGCTACTCC
AATATGAAGG AGAAGGTTGA GCCGCATCCA CATATTATTG AGCTGGCCAA ACAGGCGATG
GTGGCTTGCG ATGTTGAGCC GAAAATTAAA CCTATCCGTG GTGGGACGGA TGGGGCGCGG
TTGTCATTTA TGGGATTGCC TTGTCCAAAC ATTTTCACTG GTGGCTATAA TTTCCACGGC
ATTCATGAGT TCATCACCAT TGAAGGGATG GAAGCTGCGG TACAAGTGAT TATGAAACTT
GCAGAGAAAA CGGCACTGCA TTATCGACAA TAA
 
Protein sequence
MKNLVGRFMR YVTFDTQSKP KNHHCPSSTG QKVFAQALYE ELLELGLSDV SLDDHGYVMA 
KLPSNVNYPV PAIGFIAHMD TSPDACGKHV KPQIVEDYQG GDIALGKGDE VLSPIQYPDL
HLLHGYNLIT TDGTTLLGAD NKAGIAEIIT AMEILLADSS IPHGDISIAF TPDEEIGRGA
NHFDVAKFAA QWAYTIDGGP IGELEYENFN AATATVVCHG VNLHPGTAKD KMVNAMHIAA
QFILMMPENE TPQHTEGYQG FYHLSGATMS VAKSELKYIL RDFEASGLQA RQALMQAKVA
ELNQQLKKGR VEVSFEQSYS NMKEKVEPHP HIIELAKQAM VACDVEPKIK PIRGGTDGAR
LSFMGLPCPN IFTGGYNFHG IHEFITIEGM EAAVQVIMKL AEKTALHYRQ