| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1092 |
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| Symbol | |
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| ID | 5134787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1057319 |
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| End bp | 1057528 |
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| Gene Length | 210 bp |
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| Protein Length | 69 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531414 |
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| Product | cold shock DNA-binding domain-containing protein |
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| Protein accession | YP_001215928 |
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| Protein GI | 147671812 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.000741991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACTC CAGTTACTGG TACCGTGAAA TGGTTCAACG AAACTAAAGG CTTTGGTTTC
ATCAAGCAAG AAAACGGTCC TGACGTTTTT GCTCACTTCA GCGCAATCCA AGGTGACGGT
TTCCGCACTC TGGCTGAAGG TCAAAAAGTG GAATTCGTGA TCACTCAAGG CCAGAAAGGT
CCACAAGCTG AAAGCATCAA AGTTCTGTAA
|
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| Protein sequence | MSTPVTGTVK WFNETKGFGF IKQENGPDVF AHFSAIQGDG FRTLAEGQKV EFVITQGQKG
PQAESIKVL
|
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| |