| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1087 |
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| Symbol | |
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| ID | 5134111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1054364 |
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| End bp | 1055368 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531409 |
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| Product | response regulator |
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| Protein accession | YP_001215923 |
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| Protein GI | 147671940 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.164702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTCC CTGTTCTCAT CTGTGATGAC TCTCCACTCG CGCGCAAACA GATGGCGCGT
TCGCTTCCTG CATCGCTTAA CGCAGACATT ACCTTTGCGG TACATGGTTT GGATGCGATG
GACATTTTAG AGAAGCAAAG TTTTAAGCTC ATGTTTTTGG ATCTCACGAT GCCGGAGTTA
GACGGCTTCG AGACATTAGA AGCAATGGGG AAAAAAGGCT ACACGACGCC TGTAGTGGTG
GTATCGGGGG ATATTCAACC GAAAGCCAAA GAGCGGGTGT TAGCGCTCGG AGCCAAAGCC
TTCATTCAAA AGCCCATCGA TAAGAATGTG CTCAATGATG TGCTGAAAAT GTTGGTGGAG
CCACCCACTC AGCCACGCAT TGTCACGCCG GTTTCGGTTG AGTTGCCGAT TTTAAAACGG
CGCGATATTT ACATGGAAGT CGCGAACGTG TCGATTGGTC GAGCCGCTGA TGCCTTGGCG
CGCCATTTTG ATGTGTTTGT TCAATTACCT TTGCCTAATG TGAACATCTT TGAGGTGAGT
GAGTTACACA TGGCACTGCG TGATTTGGCT GAAAACAGTC AAGTCTCGGG GGTGTGTCAG
GGTTTTAGCG GCGAAGGAAT TGCTGGTGAA GCACTGGTGT TATTGAGTGA CTCTAGTGTG
GCGGATCTCA AAAAATTAAT GAAGGTGCCG GTCGATAGTG AAGACTTGCA AGAGTTAGAG
CTGCTGATGG ATGTCTCTAA TATTCTGGTG GGCTCATTTC TAAATGGTTT AGGCCACCAA
GCAGAAGTGC GTTTTTTCCA AAGTTCGCCC GTTTTATTGG GGCAGCATAT CTCTATTGAT
TCTGTGATTC AGTCGACCGA AGGGGCATTT AAGAAAACCA TGACCTTTGA GGTGAGTTAT
AACATTGAAG GCACCTCGAT TCGTTGTGAT TTACTGTTTA TGTTTGTCGA TGAATCGTTA
CCGCTGCTGG ACAACAAACT TTCCTATTTA ATGGAGGACT TCTGA
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| Protein sequence | MSFPVLICDD SPLARKQMAR SLPASLNADI TFAVHGLDAM DILEKQSFKL MFLDLTMPEL
DGFETLEAMG KKGYTTPVVV VSGDIQPKAK ERVLALGAKA FIQKPIDKNV LNDVLKMLVE
PPTQPRIVTP VSVELPILKR RDIYMEVANV SIGRAADALA RHFDVFVQLP LPNVNIFEVS
ELHMALRDLA ENSQVSGVCQ GFSGEGIAGE ALVLLSDSSV ADLKKLMKVP VDSEDLQELE
LLMDVSNILV GSFLNGLGHQ AEVRFFQSSP VLLGQHISID SVIQSTEGAF KKTMTFEVSY
NIEGTSIRCD LLFMFVDESL PLLDNKLSYL MEDF
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