| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1085 |
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| Symbol | ldhA |
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| ID | 5134112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1051412 |
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| End bp | 1052407 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531406 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_001215920 |
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| Protein GI | 147671787 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACG TCATTTTTTT TAGTGCAAAA CACTACGATA TCGCCTCTTT CAGCAAATTG
GTTGACCCCA CCCAGCTGTC TTTGCACTTT CATGATTTCC GATTGACCGA TAAAACGGCC
CAGATGGCAA AAGGCTGCGA AGTGGTCTGC GCTTTTGTCA ATGATGAGCT TCACGCCAGC
GTATTAGAAC AGCTTTACCA AGGGGGAACT CGTCTTATTG CCATGCGTTG TGCTGGCTTT
GATAAAGTCG ACCTTGAAGC GGCGAAGCGA CTTGGAATGC AAGTCGTCAG AGTGCCAGCC
TATTCGCCAG AAGCGGTGGC CGAACATACG GTGGGGATGA TGCTGTGTTT GAATCGCCGC
TTCCATAAAG CGTATCAGCG TACCCGTGAT GCCAACTTCT CTCTTGATGG CTTGGTGGGT
TTTAACTTCC ACGGCAAAAC GGTCGGGGTG ATCGGCTCAG GCAAAATCGG GGTGGCAACC
ATGCGCATTT TGCAAGGGCT CGGTATGCAG ATCCTCTGTT TTGATCCTTA TCCCAATCCC
GATGCGATTG CACTGGGTGC GCGCTATGTA GAGTTGTCCG AGCTTTTCGC GCAGAGTGAT
GTGATCACCC TGCACTGCCC GATGAGCAAA GAGAACTATC ATTTGCTCAA TGAGTCAGCG
TTCGATCAGA TGAAAGATGG CGTAATGATC ATTAACACCA GCCGTGGGGA ATTGCTTGAT
TCTGTGGCAG CAATTGAAGC ATTGAAACGA GGCCGAATCG GCGCGCTAGG CTTGGATGTG
TATGACAATG AGAAAGATCT GTTCTTCCAA GACAAGTCCA ACGATGTGAT CGTCGATGAC
GTATTCCGCC GCCTTTCTGC TTGTCATAAC GTGCTGTTCA CTGGTCACCA AGCCTTTTTG
ACCGAAGATG CACTGAACAA TATTGCGCAA ACTACGCTCA ATAACATCCA GCTCTTTTTT
GACAATCAAG CATCGGGTAA TGAATTAATT CAATAA
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| Protein sequence | MLNVIFFSAK HYDIASFSKL VDPTQLSLHF HDFRLTDKTA QMAKGCEVVC AFVNDELHAS
VLEQLYQGGT RLIAMRCAGF DKVDLEAAKR LGMQVVRVPA YSPEAVAEHT VGMMLCLNRR
FHKAYQRTRD ANFSLDGLVG FNFHGKTVGV IGSGKIGVAT MRILQGLGMQ ILCFDPYPNP
DAIALGARYV ELSELFAQSD VITLHCPMSK ENYHLLNESA FDQMKDGVMI INTSRGELLD
SVAAIEALKR GRIGALGLDV YDNEKDLFFQ DKSNDVIVDD VFRRLSACHN VLFTGHQAFL
TEDALNNIAQ TTLNNIQLFF DNQASGNELI Q
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