| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1084 |
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| Symbol | |
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| ID | 5134533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1052396 |
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| End bp | 1053880 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531407 |
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| Product | hypothetical protein |
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| Protein accession | YP_001215921 |
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| Protein GI | 147672196 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.387482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACACCA TTATGCCGTT ACCCACTCAT TTTTATACTA CGCAGCAGCT CAAACAAGGC
GAACAAGATG CCGCGAGTGA GCGAGGTCTT GAGCTCTTTC ATTTAATGGA ACGCGCAGGA
CAAGCGGTAT TCACCATCGC TTTTGCTCAG TATCCCACCA GCCACCACTG GTTAATTTGT
TGCGGTGGCG GAAATAATGG TGGGGACGGT TATATTGTCG CGGTATTAGC CAGACATATG
GGGATTGATG TTACCGTATG GCAGTTAGGC GATCCTGAAA AACTGCCAGC CGATGCCCAT
CGTGCTTATC AGCAATGGAA AGAGTTGGGT GGTGCGGTCT ACGCTCCACA GTCTGAAGTG
CCCGAATCGA CGGATGTGAT TATTGATGCG CTGTTTGGCA TTGGTTTAAA AGAGGTGTTA
CGCCCGCAGG TGGTACCGCT CGTCGAGTTA CTCAACCAAA GTGGCAAGCC GATTGTGGCG
GTCGATGTGC CTTCAGGGCT GTGTGCCGAT ACCGGTCAAG TGATGGGGAC ATGCATTAAA
GCGCAGCATA CGGTGAGTTT GATTGGATTA AAACAAGGCT TAGTGACTGG CCAAGCCCGC
TGTTATGTTG GAACGTTACA CTATGCCGGG CTTGGGGTTG AAGAAGTGTT TGCCCAGCAC
AATACGCCAT CCTTAGTCTC CATCGATGGT AAGCTAAGGC ACAGTTTATT GCCGCCACGT
CAAGCTTGTA CTCACAAAGG CCAAAATGGC AAAGCTTTGA TCGTTGGAGG CAATGAGGGT
ATGGGCGGAG CCTTGATTTT GTGTGCTTCC GCTTGTGCTC GTTCGGGAGC TGGGCTGAGC
GCGGCAATGA CCCATCCCGA TAACGTTACC GCTATGCTGA CGATTACACC GGAAGTGATG
AGCACAAGCT GGAATAAACA GCATTTATTT GAAGAGCGCA TTGAATGGTG TGATGCCCTT
GCTTTGGGGC CCGGATTAGG GCGAGATGCG CAAGCGCAGC AGATTATGCA GCGCTTAAGT
AGCTTGAAGG TTCCGAAAGT GTGGGATGCG GATGCACTCT ATTTTCTAGC GCATAACCCC
AGCTATGATG CGCAGCGGAT CATTACACCG CATCCCGTCG AAGCGGCGCG TTTATTGGGC
TGTGAAGTGG AAGAGGTGGA GCAAGATCGT TTTGCGGCGA TTCGCCAGCT TCAGCAACGC
TATGGAGGCG TTGTCGTGCT CAAAGGTGCG GGGACTTTAG TGGATGATGG GAAAGAGATC
GCGGTCTGCT TACAGGGGAA TCCTGGAATG GCCAGTGGGG GGATGGGCGA TGTACTTACT
GGCATTATTG TGGCGCTATT AGCGCAAAAA ATTCCCTTAG CGGATGCGGC AAAACTCGGG
GTTTGGCTAC ACAGTAGCGC TGCGGATCTC AATACCAAAT CGCATGGCCA GAGAGGACTT
CTGGCCAGCG ATTTATTGCC TCATCTGCGT GAGTTATTGA ATTAA
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| Protein sequence | MDTIMPLPTH FYTTQQLKQG EQDAASERGL ELFHLMERAG QAVFTIAFAQ YPTSHHWLIC
CGGGNNGGDG YIVAVLARHM GIDVTVWQLG DPEKLPADAH RAYQQWKELG GAVYAPQSEV
PESTDVIIDA LFGIGLKEVL RPQVVPLVEL LNQSGKPIVA VDVPSGLCAD TGQVMGTCIK
AQHTVSLIGL KQGLVTGQAR CYVGTLHYAG LGVEEVFAQH NTPSLVSIDG KLRHSLLPPR
QACTHKGQNG KALIVGGNEG MGGALILCAS ACARSGAGLS AAMTHPDNVT AMLTITPEVM
STSWNKQHLF EERIEWCDAL ALGPGLGRDA QAQQIMQRLS SLKVPKVWDA DALYFLAHNP
SYDAQRIITP HPVEAARLLG CEVEEVEQDR FAAIRQLQQR YGGVVVLKGA GTLVDDGKEI
AVCLQGNPGM ASGGMGDVLT GIIVALLAQK IPLADAAKLG VWLHSSAADL NTKSHGQRGL
LASDLLPHLR ELLN
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