Gene VC0395_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_1082 
Symbol 
ID5135016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp1049042 
End bp1049884 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID640531404 
Productputative potassium channel protein 
Protein accessionYP_001215918 
Protein GI147671918 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1226] Kef-type K+ transport systems, predicted NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCA CCCTTCGCAA AAAGCTGTTA GAAAAAGTAG AAAACACGAC AGAAACTCCG 
ATGCTGATCC TTTCTGTCGT TTATGTTGTC GTCGCGTTGC TGCCTGACAT TGCCGTTTTA
TCTCCCGATG ATCTTGAGTT TCTTGATGGC TTACTCTGGA TTGTGTGGGG CATTTTTGCG
ACAGAGCTGT TAGTCAAAAT CTTCGTCAGC CCTAAACCAC TGCAATATAT GATGCAAAAT
TGGCCGGACG TACTTATCGT GGCGATGCCG TTTCTGCGTC CCCTGCGTTT CCTACGTATT
TTGTTGGTGC TGCCCAAAGC GTGGAGACAA ACCAAATCGG TTCTGCGCCA AAAAACCTTC
AGCTTTATCG GTCTGACGAG TCTTTCTACT GTGCTGCTCT CTGCGGCGTT TGTATATCTG
GTAGAGAAAG GAACCCCTAG CCCCATCAAT AGCTATGCCG ACGCGCTGTG GTGGGCGATG
TCGACCATTA CTACGGTAGG TTATGGGGAT ATGTACCCGG TCACAGGGTT TGGGCGTGGA
GTCGCGGTAT TTTTGATGCT GACAGGGATC ACCCTGTTTG GTCTATTAAC CGCGAGTGTG
GCTTCTTTTT TTGTTGAGGA TGATACGGCC AAACAAGATC ATCTCTCCCT CAATCTCTTG
CTTGAAAAAA ACCAGCAGTT AGAAACACAG TTGAATCAAT TGGTTGAAAC TCAGCAACCG
AGAAAGCGTT TTCATCTAGC GAGCTACCGT CGGCAGCTCG CAGAACGTGA AACAGTACGG
AAAAATCAGA AACCAAAGCG TCGTCGAATA AAACTTCCGT CGCAAGACAA TCGCAACGCC
TAA
 
Protein sequence
MKLTLRKKLL EKVENTTETP MLILSVVYVV VALLPDIAVL SPDDLEFLDG LLWIVWGIFA 
TELLVKIFVS PKPLQYMMQN WPDVLIVAMP FLRPLRFLRI LLVLPKAWRQ TKSVLRQKTF
SFIGLTSLST VLLSAAFVYL VEKGTPSPIN SYADALWWAM STITTVGYGD MYPVTGFGRG
VAVFLMLTGI TLFGLLTASV ASFFVEDDTA KQDHLSLNLL LEKNQQLETQ LNQLVETQQP
RKRFHLASYR RQLAERETVR KNQKPKRRRI KLPSQDNRNA