| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1079 |
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| Symbol | |
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| ID | 5135033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1045563 |
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| End bp | 1046594 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531401 |
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| Product | integrase |
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| Protein accession | YP_001215915 |
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| Protein GI | 147671754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGTTC GCAATCTTAA AGATGGCAGC AAAAAACCGT GGCTTTGCGA GTGTTACCCG
CAAGGCCGCG AAGGTAAGCG CGTGCGTAAA AGATTCGCCA CCAAAGGTGA GGCCACCGCT
TATGAAAACT TCATCATGCG TGAGGTGGAT GATAAACCGT GGATGGGGAG TAAGCCTGAT
AATAGGCGGC TGAGTGACAT TGTTGAATTA TGGTACTCGC ATTACGGTCG TACATTAGTG
AATGGTGATG TGATCATTCA AAAGTTTCAC CACATGGTGA ATGCGATGGG CAACCCTATC
GCAGCCACCT TTTCAGCAAA AACTTATTCA GACTTCCGAA GCAGACGTAT GTCCGGCGAG
CTTATTTTTG TTGATGGCCG TTGGAATCGA GGCAAACCCA GCATTTCAAC CATGAATTCT
GAGCTGGCAC GTTTTAAAGC GGTATTCAAT AAACTGAAAG AACTGGGTGA ATGGAATGCA
CCGAACCCAC TTGATGACGT AAAGCCATTT AGGGAATCTG AAAGGGAGAT GTCTTTCCTC
ACCACCGAGC AAATCAAACT GCTGCTTGAG TTAGTTGCTC AACACGAAAT TGCTGACATG
CTCAAGATTG TTAAGATTTG CCTTTCAACT GGCGCACGCT GGAATGAGGC GGCAAAACTG
CGGGGTAGCC AGCTATCCGA GTATAAAATT ACCTACACGA ACACTAAAAC CAAGAAGAAC
AGGACAGTAC CCATTTCTCG TGAACTCTAC GAGGAGATAT ATAAGCCCAC TTCTGGCCGT
TTGTTTGAAG AGTGCTATAC ACCGTTTTGC TACATTCTAA AAAATAAGCT CGGGATCACT
CTTCCATCTG GGCAAGCTTC TCACGTATTG CGTCACACCT TCGCCAGCCA CTTTATGATG
AATGGCGGCA ATATTCTGGT GCTAAGAGAC GTTCTCGGCC ATGCGGATAT CTCGATGACG
ATGCGTTATT CGCACTTTGC CCCCGACCAT TTGTCAGACG CGATCACACG AAACCCGCTT
TCCAATTTGT AA
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| Protein sequence | MSVRNLKDGS KKPWLCECYP QGREGKRVRK RFATKGEATA YENFIMREVD DKPWMGSKPD
NRRLSDIVEL WYSHYGRTLV NGDVIIQKFH HMVNAMGNPI AATFSAKTYS DFRSRRMSGE
LIFVDGRWNR GKPSISTMNS ELARFKAVFN KLKELGEWNA PNPLDDVKPF RESEREMSFL
TTEQIKLLLE LVAQHEIADM LKIVKICLST GARWNEAAKL RGSQLSEYKI TYTNTKTKKN
RTVPISRELY EEIYKPTSGR LFEECYTPFC YILKNKLGIT LPSGQASHVL RHTFASHFMM
NGGNILVLRD VLGHADISMT MRYSHFAPDH LSDAITRNPL SNL
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