Gene VC0395_1076 details

Gene Information

• Locus tag: VC0395_1076
• ID: 5134862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009456
• Strand: +
• Start bp: 1043572
• End bp: 1044219
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640531398
• Product: putative bacteriophage CI repressor protein
• Protein accession: YP_001215912
• Protein GI: 147672020

Plasmid Coverage information

• Num covering plasmid clones: 60
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACA CAAAGATTCC ACCTTTTGAC TATATAAAAG GTCATGAATT CACAGAGGTT 
TTAAAGGAAG TTACAGGATG TTCAACGTTT GGCGATATGG CTGAACTTTT TGATGTACCT 
AAAGCGACTT TCAGCACTTG GAACCTTCAC AATCGTACAT CTCACGAATT GATGGTGAGA 
CTTCATCTGG CGAAGGGCAT CCCTATTGCA AAGATGGCGC TAGGCATTGA TGAACCAGCA 
ACGCATCAAG TTGCCGAGGC TCCTCAGGAT TACACCCACC TTCAGAAGAA GTTGATTAAT 
CCCCAGCATG AAACCGTCAT TCTCAAATCA TTCTGCCTGA CAAACGGTCA GCTTCTTGAA 
ACTGGCGAGA TCCCTTACCC CGTTCGCCGG ATGAATAGCT TTAACCTGAA ATCTGGCAGC 
ACGATTGAAG TTGAAACCAA TGAGGCGCTT TATCTGGTGG ATAACGATTC GCGGGATGCG 
GTTTCCGGTA ACTACTTGAT TGATATTGAT GGCCGTTTGT CGGTTAACCA TATTCAGCGT 
TTACCCGGCA AAAAGCTGGC GATTGCGTTT GGTGAAAGCA CGATTGAAGT ATCAGAACAC 
GACATTAAAG TGCTTGGCCG TGTCGCGGTG ACTCTAAGAA AAGATTGA 

 

Protein sequence

MKNTKIPPFD YIKGHEFTEV LKEVTGCSTF GDMAELFDVP KATFSTWNLH NRTSHELMVR 
LHLAKGIPIA KMALGIDEPA THQVAEAPQD YTHLQKKLIN PQHETVILKS FCLTNGQLLE 
TGEIPYPVRR MNSFNLKSGS TIEVETNEAL YLVDNDSRDA VSGNYLIDID GRLSVNHIQR 
LPGKKLAIAF GESTIEVSEH DIKVLGRVAV TLRKD