Gene VC0395_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_1053 
Symbol 
ID5134097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp1026922 
End bp1027383 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content52% 
IMG OID640531375 
Productphage head completion protein (GPL) 
Protein accessionYP_001215889 
Protein GI147672242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACAG GCAGCAACAC CAGCTTTCAG GATACCACCA TCGAGAACGA TGGATTCTGG 
CCAAACATCA ACGCAGGAGA TTTCGAACGC CTGCGTGGAA CGCCAGCCGC GCAAGACGAT
GAGCGCATCG CTCACGCTGT GGTTAACGCC ATCGCATCGG TAAACCTGCA ACTGAGTGAT
CTGAAAGCCA AGTACATCGC CGCAGGTCAT GCCAGCGCAG CAGACGTGCC AGCGTTTCCA
AAAGTGAATG ATAAAAACCT CATCGTCATT CAGTACCAAA GCGCCGTGTT TGCTCGGGCA
AAAGCCGATT TACTGCCCGA TTTCGCCACC GTCAGCCAGA AAAAAGAAGG TGATCACCTC
GCTGAGCGAT CACAAGAAAC CAAAAACGAA CTGCTGGCCG AAAGTGAACG CATCATCCGC
AATATGCTCG GCAAAAATCG CGCAAGCGTG GAGCTGATAT GA
 
Protein sequence
MFTGSNTSFQ DTTIENDGFW PNINAGDFER LRGTPAAQDD ERIAHAVVNA IASVNLQLSD 
LKAKYIAAGH ASAADVPAFP KVNDKNLIVI QYQSAVFARA KADLLPDFAT VSQKKEGDHL
AERSQETKNE LLAESERIIR NMLGKNRASV ELI