| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1024 |
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| Symbol | rhlE-2 |
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| ID | 5133937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 1003972 |
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| End bp | 1005327 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531346 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | YP_001215860 |
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| Protein GI | 147672261 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTA CCTCGCTCGG TCTGTCTGCG CCAATCCTTA AAGCTATTGA AGAGAAAGGA
TACAACACGC CTTCACCGAT TCAGTTACAG GCTATTCCTG CGGTTTTAGC AGGCAAAGAC
GTGATGGCCG CAGCTCAAAC TGGCACAGGA AAAACGGCTG GCTTTACGCT ACCTATTTTA
GAATTGCTGG CAAAAGGGCC AAAAGTTCGC GCCAATCAAG TTCGTGCTTT AATCCTTACC
CCAACGCGTG AACTGGCCGC ACAAATCCAA GACAATGTCA TGCTCTATGG CCGCCATCTA
CCGCTCAAGA GCGCGGTTGT GTTTGGTGGT GTGAAAATTA ACCCACAAAT GCAGCGAATG
TGTAAAGGTG CGGATATCTT AGTGGCAACC CCAGGCCGCT TAATGGATCT GTATAACCAA
AATGCGGTCA AATTTGATCA GTTGGAAATT TTGGTACTTG ACGAAGCAGA TCGCATGCTC
GACATGGGCT TTATTCGTGA CATTCATAAG ATACTGAAAT TATTGCCTGA AAAGCGCCAA
AACCTACTGT TTTCAGCTAC CTTCTCGACC GAAATCCGTG AGCTTGCCAA AGGCTTGGTG
AATAACCCCG TCGAAATTTC AGTCAGCCCA GCCAACTCAA CGGCAAGAAC CGTTGAGCAG
TGCATTTATC CTGCTGATGT GAAAAAGAAA CCGGACATGC TGGTGAAATT GGTCAAAGAG
GGGAATTGGC AACAAGTGCT GGTATTTATG CGTACCAAGC ATGGTGCCAA CCGCTTAGCG
ACCTATCTCA ACGAGCAAGG TTTAACCGCG GCCGCGATTC ACGGCAATAA GAGCCAAGGC
GCACGCACCC GAGCACTGGC GGATTTTAAA GCGGGAGAGG TGCGTATTCT GGTCGCAACA
GATATTGCGG CGCGTGGCAT TGATATCCCG CAACTGCCTC AAGTGGTGAA TTTTGAATTG
CCGAAAATTG CTGAAGATTA CGTGCACCGA ATTGGCCGAA CAGGCCGAGC AGGTGAAGTC
GGTAAAGCGA TTTCTTTGGT GAGTGCCATT GAAGCACCGG AATTATTTGC GATTGAGCGT
TTAACGCAAG CCTTACTGCC CCGTGTAAAT TTAGCGGGAT TTGAGCCGAC CAACCAACTC
CCTGAGTCAA AATTAGACAC TCGACCTTTG AAGCCGAAAA AGCCCAAAAA GCCTAAAAAG
GTAGAGGGAG CTGGAGAAAA CAAAGGCAGC GTAGCTGAAA ACAAACCTAA AGCTGGCCAC
CGAGGCCAGC CTACAGGACA AGCTCGCACA GCGAAAAAAG GCGGCACTCA TTCGGAGCCG
AAAAAACCGA CAAAGCGCCC TGTTAGAAAT GGGTAA
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| Protein sequence | MGFTSLGLSA PILKAIEEKG YNTPSPIQLQ AIPAVLAGKD VMAAAQTGTG KTAGFTLPIL
ELLAKGPKVR ANQVRALILT PTRELAAQIQ DNVMLYGRHL PLKSAVVFGG VKINPQMQRM
CKGADILVAT PGRLMDLYNQ NAVKFDQLEI LVLDEADRML DMGFIRDIHK ILKLLPEKRQ
NLLFSATFST EIRELAKGLV NNPVEISVSP ANSTARTVEQ CIYPADVKKK PDMLVKLVKE
GNWQQVLVFM RTKHGANRLA TYLNEQGLTA AAIHGNKSQG ARTRALADFK AGEVRILVAT
DIAARGIDIP QLPQVVNFEL PKIAEDYVHR IGRTGRAGEV GKAISLVSAI EAPELFAIER
LTQALLPRVN LAGFEPTNQL PESKLDTRPL KPKKPKKPKK VEGAGENKGS VAENKPKAGH
RGQPTGQART AKKGGTHSEP KKPTKRPVRN G
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