| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1018 |
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| Symbol | |
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| ID | 5134525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 996931 |
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| End bp | 998877 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531340 |
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| Product | sensory box sensor histidine kinase |
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| Protein accession | YP_001215854 |
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| Protein GI | 147672043 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACC GTGACGCAGA AGAAATGGAC AGTAACCCGA TGTTCAGCCG TATTGGCCGA
CGCATCATTC TCATCATGGT GATACTCAGT GGTGCCGTGA CTTTAGCCAT GACGATTACC
CAAACCTTCA TCGACTACAA CCGTGAGTTC AATAATGTCC AAGCTAGGCA TGATGAAATC
CAAACCATTC ACGCCGAGCT TCTCGCCAGC TCACTGTGGA ATTATGACTT AGTCGTGCTT
ACCCAAAGGC TGGAAGGCTT GGTCAACTTA CCCAATGTCG ATTATATGAA GATCACCTCT
GGCGACTACC ATTTCTCAGC CGGAGAACCC GTAACCAGCA TGGCATTAAA TAGCGAAATA
GCACTGGAAT ACACCAACCC AGATACTCAG GTGACTGAGA ATATCGGCAC CTTATATGTC
GAATCGGACG CCCAAGGTAT TTATAACTAT CTGATTCGCC AGTTTCTGCT CACCTTAGCC
GTCAATGCGC TGAAAACCGC CATTGTGTGC TATTTAATCT TGCTGATTTT CCACGCCAGT
GTGAATCAGC GGATTTTTGC GATTGCGCAA TTTCTACGTC GCTACAATCC CCGCCACCCT
AAAAAACCAC TACAACTGCC TTATAACCCT TGGATTATGG AGAAAAATGA TGAGTTACAA
TGGCTGGGAG ATGAAACTAA TCGGATTGCT AACAACGTAA CAACCCTTTA CCGCACCATC
AAATCGGAGC AAGAACGGTT GGAAGATTTT GCACAAGCCG CCTCCGATTG GTTATGGGAA
ACCAACTGCC ATGGCGAGCT GATTTATAGC TCAGAAGCCA TGTCTACTGC GTTAGCGATT
GAGGAAGATT CCAAACCACT CATAGTAAGT ATTGCTCCGC TTCAATCCTC AACCGCGCTC
ATGAACTGCT TACTCAAACA GCAAGATTTC TCAAATTGTG AAGTGGAATT GACACTCAGT
GATGGCACTC AAGCCTATTT ACTGTTTCAA GGCATTGCTC GCTATGCCGA TGAGCAATTT
CTCGGATTTC GTGGTACTGC AATCAACATT ACCTCGCTCA AACTGGCTCA ATTGAGTTTA
GAAATCATGA ACCAAGATCT GGAGCAGCAA GTCGCGAATC GAACGCAAGA TTTAGCACTC
AGTTTAACTC GTTTGCAAGA AACCCAAACC CAACTGATTG AATCTGAAAA GCTCGCCGCT
CTCGGTGGCT TAGTGGCAGG CGTCGCACAC GAAGTGAATA CGCCGTTAGG TATTGCGGTG
ACAGCCACTT CTGTGATTCA GGAAACACGA GAAAGCTTGC TCAACGCCTT TAATCAGCAA
ACCCTCACCA GCCAACAGTT TGCAGAATTG ATGGAGAGGA TGACTCAAAG CACCCTGATG
CTAGAAACCA ATCTTAACCG TGCCGCACGA CTGGTTCGAG ATTTTAAGCA GACCGCCGTC
GACCAAGTTT CGGAAAGCCG TAGCCAATTT CACGTAAAAC AAGTCCTCGA CGCGCTGATG
GCCAGCTTAC ACAGTGAAAC CCGAAAAATT CCGGTGACTC CGCAACTGCA TGGGGAGGAT
TCTGTGATGA TGAACAGCTT ACCTGGTGTA CTGACACAGA TTATGACTAA CTTGGTCATG
AACAGTGTGA ATCACGCTTT CGCAGAGACT GCTCAGCCAG AGATTGATAT CCACTTCTAT
CAAAAAGATC AGCAGATCAT GATTGAATAT CGAGACAATG GATGCGGCGT AGCAAAAGAA
CTGCATCAAA AAATCTTTGA ACCATTTTTT ACCACTAAGC GAGGTCAAGG TGGCTCAGGA
TTAGGATTAA ATCTGGTGTT TAATTTGGTT AAGCAAAAGC TGCATGGCCA ACTGGCGTTT
TCTTCCGAAC CGGGGCACGG CGTGCATTAC GTGATCACAT TACCCCAAGC GCTATCGATG
CCTCAAGTAG CCGACTGTGC GACCTAG
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| Protein sequence | MKNRDAEEMD SNPMFSRIGR RIILIMVILS GAVTLAMTIT QTFIDYNREF NNVQARHDEI
QTIHAELLAS SLWNYDLVVL TQRLEGLVNL PNVDYMKITS GDYHFSAGEP VTSMALNSEI
ALEYTNPDTQ VTENIGTLYV ESDAQGIYNY LIRQFLLTLA VNALKTAIVC YLILLIFHAS
VNQRIFAIAQ FLRRYNPRHP KKPLQLPYNP WIMEKNDELQ WLGDETNRIA NNVTTLYRTI
KSEQERLEDF AQAASDWLWE TNCHGELIYS SEAMSTALAI EEDSKPLIVS IAPLQSSTAL
MNCLLKQQDF SNCEVELTLS DGTQAYLLFQ GIARYADEQF LGFRGTAINI TSLKLAQLSL
EIMNQDLEQQ VANRTQDLAL SLTRLQETQT QLIESEKLAA LGGLVAGVAH EVNTPLGIAV
TATSVIQETR ESLLNAFNQQ TLTSQQFAEL MERMTQSTLM LETNLNRAAR LVRDFKQTAV
DQVSESRSQF HVKQVLDALM ASLHSETRKI PVTPQLHGED SVMMNSLPGV LTQIMTNLVM
NSVNHAFAET AQPEIDIHFY QKDQQIMIEY RDNGCGVAKE LHQKIFEPFF TTKRGQGGSG
LGLNLVFNLV KQKLHGQLAF SSEPGHGVHY VITLPQALSM PQVADCAT
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