| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1015 |
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| Symbol | emrD |
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| ID | 5134456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 992401 |
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| End bp | 993645 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531337 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_001215851 |
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| Protein GI | 147672247 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTAA TAAGATATTG TTTTTATCTG GAGATAACGA TGTCTGCCTC ACTTTCTGTC
GCAAAACTGA CCTTCTTTAT CGCTATTCTG GCTGCTGTCG GCCAAGCGAC ACAAACCATG
TATGTGCCTT CTATTGGTTA CATGGCGCAA GAGTTTTTGG TTTCACCAGC AGCGCTGCAA
GCTGTGATGG CGTGCTACCT GATCCCTTAC GGCTTGTCGC AATTTGTTTA CGGTACCCTT
TCTGATCGTA TTGGTCGCAA ACCGATCATT ATTGCTGGAT TGGCGATCTA CATTATCGGT
TCTTTGATTG CGCTCTTCGC CCATCAGTAT TCATGGTTTT TGATCGGTAG CTTTGTACAA
GGTCTTGGGA TTGGTTGTGG CGGTGCGATG TCTCGTACGC TCTCTCGCGA CTGTTTCGAA
GGCGCTGAGC TGCATAAAGT CAACAGCTTA ATCAGTATGT GCCTGATTTT CTCACCGTTG
GTCGCGCCGG TCTTAGGTGG CTACTTAACC GAAAGTTTTG GTTGGCGTTC AAGCTATTTG
TTTCTGTCAC TCTTTGCCAT TGCCGTAGTG ATCACCATGA TGACGAGCAT GGTAGAAACC
TTGCCAGCGA CAGCGCGTAA AAAAGAGCCC GTGCTGCGCA GTTATCATTA CGTGCTGTCG
GATCGTCGCT TCCAAGGTTA CTTAATCTGT CTTGTCGCGA CCTTTGCAGG CTTAGCCGTG
TTCGAAGCGG CGGCTGGCGT GTTATTAGGC GGTGTATTAG GCCTACCTGC GACGACCGTA
AGTTTGCTGT TTGTGTTACC CATCCCCGGC TATTTGGCGG GCGCTTGGCT CTCTAACGTG
ATTGCTCGCC ACTGGCGTGA AAAAACCGCG ATGCATGTCG GCTTACTCGC GATCTTAACG
GGCTCACTGG TCATTATGCT GCCCGGCTTA TTGGGTATGA CCACGGCCTT ATCACTGATT
GGCGGCGCAA CCATTTACTT CTTAGGGGCT GGCATTTTAT TCCCAGCCGC TACCACAGGT
GCACTTTCTC CTTTCCCTTA TCACGCGGGA ACGGGCGGTG CAATTTTAGG TGGAATGCAA
AATTTAGGGG CAGGTCTGGC TACGCTGTTT GCCGCCATGT TCCCAGCATC CGATCAACTA
CCACTCGGTA TTATTATGCT TCTGATGTCA GTACTGGCGT TGTGGGGACT TAAACGCGTT
TACACCAAAC AGCCACCGTC AGATGAGATG CCGATTGCGA TCTGA
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| Protein sequence | MFLIRYCFYL EITMSASLSV AKLTFFIAIL AAVGQATQTM YVPSIGYMAQ EFLVSPAALQ
AVMACYLIPY GLSQFVYGTL SDRIGRKPII IAGLAIYIIG SLIALFAHQY SWFLIGSFVQ
GLGIGCGGAM SRTLSRDCFE GAELHKVNSL ISMCLIFSPL VAPVLGGYLT ESFGWRSSYL
FLSLFAIAVV ITMMTSMVET LPATARKKEP VLRSYHYVLS DRRFQGYLIC LVATFAGLAV
FEAAAGVLLG GVLGLPATTV SLLFVLPIPG YLAGAWLSNV IARHWREKTA MHVGLLAILT
GSLVIMLPGL LGMTTALSLI GGATIYFLGA GILFPAATTG ALSPFPYHAG TGGAILGGMQ
NLGAGLATLF AAMFPASDQL PLGIIMLLMS VLALWGLKRV YTKQPPSDEM PIAI
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