| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1008 |
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| Symbol | hlyA |
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| ID | 5134642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 986290 |
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| End bp | 987792 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531330 |
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| Product | haemolysin |
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| Protein accession | YP_001215844 |
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| Protein GI | 147671739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGCAC GGGAGCCGGC TGATCAACTC GGTTATCGTC AGTTTGGAGC CAGTTATACG
ACGTTAGATG CCTATTTCCG TGAGTGGTCA ACCGATGCGA TTGCCCAAGA TTATCGCTTC
GTGTTTAACG CATCGAACAA TAAAGCGCAG ATCCTGAAAA CCTTTCCTGT CGATAACATT
AACGAGAAAT TTGAGCGCAA AGAGGTTTCA GGTTTTGAGC TTGGGGTGAC TGGTGGGGTG
GAAGTCAGTG GAGATGGCCC GAAAGCCAAA CTAGAGGCGA GAGCAAGTTA TACCCAGAGT
CGCTGGTTAA CCTACAACAC ACAAGACTAT CGTATTGAGC GTAATGCGAA GAATGCGCAA
GCGGTTAGCT TTACATGGAA TCGTCAACAA TACGCGACAG CAGAATCGCT ACTCAATCGT
TCGACCGATG CTTTGTGGGT GAATACCTAC CCGGTAGATG TAAACCGTAT TAGCCCGCTG
AGCTACGCGA GTTTTGTGCC GAAAATGGAT GTGATTTATA AAGCCTCAGC CACAGAGACA
GGCAGTACGG ATTTTATCAT CGACTCTTCG GTCAATATCC GCCCAATCTA TAACGGTGCT
TATAAGCACT ACTATGTGGT CGGTGCTCAT CAGTCCTACC ATGGCTTTGA AGATACCCCA
CGTCGTCGAA TCACGAAATC GGCAAGCTTT ACGGTCGATT GGGATCACCC AGTATTCACG
GGTGGCCGCC CGGTCAACCT ACAACTTGCC AGCTTTAACA ACCGCTGTAT TCAAGTCGAT
GCTCAAGGTC GCTTGGCGGC CAATACGTGC GATAGCCAGC AATCAGCGCA ATCGTTCATC
TATGATCAGC TTGGTCGTTA TGTGAGTGCG AGTAACACCA AGCTCTGTCT TGATGGTGAG
GCATTAGACG CATTGCAACC CTGTAACCAA AACCTGACTC AGCGTTGGGA GTGGCGTAAA
GGCACAGATG AATTGACCAA TGTCTACAGC GGCGAGTCCC TTGGACATGA CAAACAAACC
GGTGAGCTTG GTTTGTATGC GAGCAGCAAC GATGCGGTAA GTTTACGTAC CATCACCGCT
TATACCGATG TGTTTAATGC GCAAGAAAGT TCGCCGATTC TGGGTTACAC ACAAGGGAAA
ATGAATCAGC AGCGTGTGGG ACAAGATCAT CGTTTGTATG TGCGAGCGGG TGCTGCCATT
GATGCATTAG GGTCCGCCTC CGATTTATTG GTTGGTGGCA ATGGTGGTAG CTTGAGTTCG
GTGGATCTGT CCGGCGTGAA ATCCATCACG GCAACCTCTG GTGATTTCCA ATATGGCGGT
CAGCAGTTGG TGGCGCTGAC ATTCACCTAC CAAGATGGAC GTCAGCAAAC GGTAGGCTCG
AAAGCGTATG TCACCAATGC TCATGAAGAC CGTTTCGATT TACCGGCTGC CGCTAAGATC
ACTCAACTGA AAATTTGGTC TGACGATTGG TTGGTGAAAG GGGTTCAATT TGATTTGAAC
TAA
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| Protein sequence | MTAREPADQL GYRQFGASYT TLDAYFREWS TDAIAQDYRF VFNASNNKAQ ILKTFPVDNI
NEKFERKEVS GFELGVTGGV EVSGDGPKAK LEARASYTQS RWLTYNTQDY RIERNAKNAQ
AVSFTWNRQQ YATAESLLNR STDALWVNTY PVDVNRISPL SYASFVPKMD VIYKASATET
GSTDFIIDSS VNIRPIYNGA YKHYYVVGAH QSYHGFEDTP RRRITKSASF TVDWDHPVFT
GGRPVNLQLA SFNNRCIQVD AQGRLAANTC DSQQSAQSFI YDQLGRYVSA SNTKLCLDGE
ALDALQPCNQ NLTQRWEWRK GTDELTNVYS GESLGHDKQT GELGLYASSN DAVSLRTITA
YTDVFNAQES SPILGYTQGK MNQQRVGQDH RLYVRAGAAI DALGSASDLL VGGNGGSLSS
VDLSGVKSIT ATSGDFQYGG QQLVALTFTY QDGRQQTVGS KAYVTNAHED RFDLPAAAKI
TQLKIWSDDW LVKGVQFDLN
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