| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1006 |
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| Symbol | hlyC |
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| ID | 5134504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 983059 |
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| End bp | 984078 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531328 |
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| Product | lactonizing lipase |
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| Protein accession | YP_001215842 |
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| Protein GI | 147671929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.169122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTGT TTTCAGTTAA TGAGACTCAC GCCACTTCGT GTGGTTCCAA GACTGAAGAC
AAGAACGAGA AGGAATATCC CTTGAATAAA ATCATTATAT TAATCGCTCT CTCACTGTTT
TCTTCCTCAA TCTGGGCCGG AACCAGTGCT CACGCGTTAT CGCAACAAGG CTATACCCAA
ACCCGTTATC CAATTGTCTT AGTTCATGGC CTATTTGGCT TCGACACCTT GGCGGGGATG
GATTACTTTC ACGGCATTCC ACAATCACTG ACCCGAGATG GCGCTCAAGT GTATGTGGCA
CAGGTTTCAG CGACCAACAG CTCCGAGCGC CGAGGTGAGC AGTTATTGGC TCAGGTGGAA
TCGCTACTGG CGGTAACCGG AGCGAAAAAA GTGAACTTGA TTGGGCATAG TCATGGTGGC
CCCACCATTC GCTATGTGGC ATCAGTGCGT CCGGATTTAG TCGCCTCAGT GACCAGTATT
GGCGGGGTGC ATAAAGGCTC TGCCGTTGCC GACTTAGTGC GTGGTGTGAT TCCATCGGGT
TCCGTGAGTG AGCAGGTAGC GGTTGGGTTA ACCCAAGGCT TGGTGGCTTT GATTGATCTG
CTCTCTGGCG GAAAAGCGCA TCCACAAGAT CCCCTTGCTT CGCTGGCGGC GCTCACCACC
GAAGGATCGC TGAAATTCAA TCAGTATTAT CCTGAAGGTG TTCCCACATC AGCGTGTGGA
GAGGGGGCGT ACCAAGTGAA TGGGGTACGT TACTACTCAT GGAGTGGCGC TGCGACCGTC
ACCAATATTC TTGATCCAAG CGATGTGGCG ATGGGGTTGA TTGGGTTGGT CTTTAATGAG
CCGAATGATG GCTTGGTCGC AACCTGCAGT ACTCATCTTG GCAAAGTGAT CCGTGATGAC
TACCGGATGA ACCATTTGGA TGAGATCAAC GGTCTGCTTG GTATTCACTC CCTGTTTGAA
ACCGATCCGG TAACGTTATA TCGCCAGCAT GCGAACCGTC TCAAACAAGC TGGATTGTAG
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| Protein sequence | MTLFSVNETH ATSCGSKTED KNEKEYPLNK IIILIALSLF SSSIWAGTSA HALSQQGYTQ
TRYPIVLVHG LFGFDTLAGM DYFHGIPQSL TRDGAQVYVA QVSATNSSER RGEQLLAQVE
SLLAVTGAKK VNLIGHSHGG PTIRYVASVR PDLVASVTSI GGVHKGSAVA DLVRGVIPSG
SVSEQVAVGL TQGLVALIDL LSGGKAHPQD PLASLAALTT EGSLKFNQYY PEGVPTSACG
EGAYQVNGVR YYSWSGAATV TNILDPSDVA MGLIGLVFNE PNDGLVATCS THLGKVIRDD
YRMNHLDEIN GLLGIHSLFE TDPVTLYRQH ANRLKQAGL
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