Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_0998 |
Symbol | vctC |
ID | 5134898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009456 |
Strand | - |
Start bp | 973640 |
End bp | 974404 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640531320 |
Product | vibriobactin and enterobactin ABC transporter, ATP-binding protein |
Protein accession | YP_001215834 |
Protein GI | 147671639 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4604] ABC-type enterochelin transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000010903 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAC TGGAAAAGCT CACCAAACAT TTTGGTACCA AGCGCGTGGT ACATGACGCC AGTGCTCAGT TTGATAAAGG GCAGGTGACG GCGATTATCG GCCCTAATGG CGCAGGCAAA AGTACGCTGC TTTCAATGGC GAGCCGTTTG GTCAATCGGG ATGCCGGTAA AGTCTGGATT GAGCAGCGTG AGTTGGTGGA GTGGAACACC AAGGCGCTGG CCCAAAAGCT AGCGGTGTTG CGTCAATCGA ATGTGCTCAA TATGCGTTTT ACGGTGCGAG AGTTGACGGC TTTTGGCCGT TTTCCTTACA GCCAAGGAAA ATTGACCACA CAAGATGAGC AGATCATCAA CCAAGCGATC GAGTATCTCG ATCTCGAAAC CATTCAGTAT CAGTATCTGG ATGAACTGAG TGGTGGTCAG CGTCAACTCG CGTTTATCGC CATGGTCATG GCGCAAGATA CCGATTACGT CTTCCTCGAC GAGCCGTTAA ACAATCTGGA TATCAAGCAT TCGCTGCAAA TCATGTCTAC GCTGCGCCGT TTAGCCCATG AGCTGAATAA GGCGGTGGTG GTGGTGATCC ACGACATCAA CTTTGCTTCC TGCTACGCCG ATAAAATCGT CGCATTGAAA AAAGGCGAAG TCGTAGCCAC AGGCTCGGTG CGTGATGTGA TCCAATCTGA AGTGTTGAGC GCCATTTACG ATACCCCATT TAATGTGATT GAGATGCAGG GGCAGCGCTT ATGTCTCTAT ACTCTTCCGA CGTGA
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Protein sequence | MIQLEKLTKH FGTKRVVHDA SAQFDKGQVT AIIGPNGAGK STLLSMASRL VNRDAGKVWI EQRELVEWNT KALAQKLAVL RQSNVLNMRF TVRELTAFGR FPYSQGKLTT QDEQIINQAI EYLDLETIQY QYLDELSGGQ RQLAFIAMVM AQDTDYVFLD EPLNNLDIKH SLQIMSTLRR LAHELNKAVV VVIHDINFAS CYADKIVALK KGEVVATGSV RDVIQSEVLS AIYDTPFNVI EMQGQRLCLY TLPT
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