Gene VC0395_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_0998 
SymbolvctC 
ID5134898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009456 
Strand
Start bp973640 
End bp974404 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content50% 
IMG OID640531320 
Productvibriobactin and enterobactin ABC transporter, ATP-binding protein 
Protein accessionYP_001215834 
Protein GI147671639 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4604] ABC-type enterochelin transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000010903 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAC TGGAAAAGCT CACCAAACAT TTTGGTACCA AGCGCGTGGT ACATGACGCC 
AGTGCTCAGT TTGATAAAGG GCAGGTGACG GCGATTATCG GCCCTAATGG CGCAGGCAAA
AGTACGCTGC TTTCAATGGC GAGCCGTTTG GTCAATCGGG ATGCCGGTAA AGTCTGGATT
GAGCAGCGTG AGTTGGTGGA GTGGAACACC AAGGCGCTGG CCCAAAAGCT AGCGGTGTTG
CGTCAATCGA ATGTGCTCAA TATGCGTTTT ACGGTGCGAG AGTTGACGGC TTTTGGCCGT
TTTCCTTACA GCCAAGGAAA ATTGACCACA CAAGATGAGC AGATCATCAA CCAAGCGATC
GAGTATCTCG ATCTCGAAAC CATTCAGTAT CAGTATCTGG ATGAACTGAG TGGTGGTCAG
CGTCAACTCG CGTTTATCGC CATGGTCATG GCGCAAGATA CCGATTACGT CTTCCTCGAC
GAGCCGTTAA ACAATCTGGA TATCAAGCAT TCGCTGCAAA TCATGTCTAC GCTGCGCCGT
TTAGCCCATG AGCTGAATAA GGCGGTGGTG GTGGTGATCC ACGACATCAA CTTTGCTTCC
TGCTACGCCG ATAAAATCGT CGCATTGAAA AAAGGCGAAG TCGTAGCCAC AGGCTCGGTG
CGTGATGTGA TCCAATCTGA AGTGTTGAGC GCCATTTACG ATACCCCATT TAATGTGATT
GAGATGCAGG GGCAGCGCTT ATGTCTCTAT ACTCTTCCGA CGTGA
 
Protein sequence
MIQLEKLTKH FGTKRVVHDA SAQFDKGQVT AIIGPNGAGK STLLSMASRL VNRDAGKVWI 
EQRELVEWNT KALAQKLAVL RQSNVLNMRF TVRELTAFGR FPYSQGKLTT QDEQIINQAI
EYLDLETIQY QYLDELSGGQ RQLAFIAMVM AQDTDYVFLD EPLNNLDIKH SLQIMSTLRR
LAHELNKAVV VVIHDINFAS CYADKIVALK KGEVVATGSV RDVIQSEVLS AIYDTPFNVI
EMQGQRLCLY TLPT