| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_0997 |
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| Symbol | |
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| ID | 5133980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | + |
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| Start bp | 972518 |
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| End bp | 973594 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531319 |
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| Product | AraC/XylS family transcriptional regulator |
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| Protein accession | YP_001215833 |
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| Protein GI | 147672282 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000000441723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACGA TTCGCATATA TGTTAAATTG AGCTCAACCA ATAGAGAAGT TGAATTGATT
ATGCAAAATC GCACATCAGT TATGGAAAAC ACGCAAAATC AACATAAGGT ATTAACCAAA
AACGGCGCAC GCCAAACGGT CACCTTGTCA CGTCATGTGG TCAAGGAGCG AGATGAGCAA
ATTGTTGCGC AAAATTTGAA TCAACCTGTG ATGGCACAAG GCCACTTTGT GGAATACGTC
AGTCCAAACG GGTTTACCTT GCATGGAGGG TCTAGCCTTG AATTGGCCGA TTGCGATGTG
ATGACCACCA GCGCGCCAGC CCTTGTCATC ATTCTCTTGC TGGAAGGCAC CTTACGCTTT
GCCTATGATG ATCTCAAACT TGAATTGTGT GCCAATCAGC ATCCACAAGC TTTAATGGTC
AATTTGGAGC AGCCGTGCAT CTTCCATCGC CGTCTGCATC AAGGGATGAC AGTACGCAAA
CTCAACATCG TTTTATCGCC CGATACATTG CAAAAATTCG CGCAACACTC CTGCCCATTG
CAACATTTTC TGCAACAAGA CAAAGCACTG GTTCCACTTT CACTGAACGA GGAAAGTTGG
CAAGCCGTTG AGTCTCTGCT CAACCGTCGT GTGATCCACA CCATCAGTGC GCATATTGCT
CGGGAAGCCA CGGTTTGGCG CTTGGTGCAT GACGCCGTGT TGCAATGCCC TAAACACGCC
ACCTCGTTAT CTCAGCACCA AGAGGGACAA TCTGAGCAAT GGATTAATCA GTTGCTGCAC
TATATCGATC AGCATTTGCA TGAAGAGATT TGCTTAGAGC AACTGGCAGA ACGCCATGCG
ATGAGCGTTT CCAACTTACA ACGCAAATTT AAAACTCGCC TGAATATGAC GATTGCACAC
TACATCCGGC ACCGACGGTT ACAACTGGCG CGTCAGCAAT TAGAGCGAGG TTTGGTCACC
ATCACAGAGG CCGCGTATGA AGCAGGCTAC CTGCACCCTT CCAACTTTAC CGCAGCGTTT
AAAAAAGCCT TTGGTATCTC TCCGCAGGCT TTTGTGGAAT TAAAACAGGC GGGTTAA
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| Protein sequence | MITIRIYVKL SSTNREVELI MQNRTSVMEN TQNQHKVLTK NGARQTVTLS RHVVKERDEQ
IVAQNLNQPV MAQGHFVEYV SPNGFTLHGG SSLELADCDV MTTSAPALVI ILLLEGTLRF
AYDDLKLELC ANQHPQALMV NLEQPCIFHR RLHQGMTVRK LNIVLSPDTL QKFAQHSCPL
QHFLQQDKAL VPLSLNEESW QAVESLLNRR VIHTISAHIA REATVWRLVH DAVLQCPKHA
TSLSQHQEGQ SEQWINQLLH YIDQHLHEEI CLEQLAERHA MSVSNLQRKF KTRLNMTIAH
YIRHRRLQLA RQQLERGLVT ITEAAYEAGY LHPSNFTAAF KKAFGISPQA FVELKQAG
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